Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC104297.1-201ENST00000393779 870 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 SNORA3.3-201ENST00000408712 125 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 AC245291.1-201ENST00000419501 328 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 MTCO1P51-201ENST00000427672 1060 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 BX679664.1-201ENST00000434429 253 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGN3Q15651 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGN3Q15651 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGN3Q15651 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 HSFY6P-201ENST00000445573 403 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 AC078785.3-201ENST00000476607 425 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGN3Q15651 RN7SL323P-201ENST00000494712 295 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 KCTD9P5-201ENST00000504141 1170 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 AC110768.1-201ENST00000509222 400 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGN3Q15651 OR5AP1P-201ENST00000529730 940 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 OR5D17P-201ENST00000531492 978 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGN3Q15651 CYCSP30-201ENST00000546447 172 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 AC008126.1-201ENST00000549019 480 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGN3Q15651 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 AC122134.1-201ENST00000565664 1104 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGN3Q15651 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGN3Q15651 MIR6758-201ENST00000620653 63 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 FP236240.3-201ENST00000623061 327 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 AP000553.6-201ENST00000641242 118 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
HMGN3Q15651 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGN3Q15651 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGN3Q15651 RPL32P3-201ENST00000359025 275 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 RNA5SP383-201ENST00000362934 120 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AL049693.1-201ENST00000402760 611 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGN3Q15651 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGN3Q15651 MTHFD2P2-201ENST00000407725 247 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 RNA5SP107-201ENST00000411358 122 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AL158073.1-201ENST00000426848 1104 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGN3Q15651 RPL23AP22-201ENST00000437556 453 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 MTND6P5-201ENST00000448266 512 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 PPIAP21-201ENST00000464473 501 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC022034.3-201ENST00000471393 478 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AC020893.1-201ENST00000502452 580 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGN3Q15651 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AC024560.2-201ENST00000507981 1497 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 HPRT1P1-201ENST00000509498 657 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGN3Q15651 FABP5P12-201ENST00000515543 389 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGN3Q15651 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGN3Q15651 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 TRAV15-201ENST00000556680 249 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AC027281.1-201ENST00000574178 758 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGN3Q15651 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AF230666.2-201ENST00000602328 725 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGN3Q15651 MIR8058-201ENST00000615737 89 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGN3Q15651 AL158062.1-201ENST00000619632 745 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGN3Q15651 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGN3Q15651 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HMGN3Q15651 AL732372.2-225ENST00000642124 456 ntBASIC3.06□□□□□ -1.92
HMGN3Q15651 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGN3Q15651 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGN3Q15651 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGN3Q15651 HSPA8P17-201ENST00000427029 1382 ntBASIC3.05□□□□□ -1.92
HMGN3Q15651 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
HMGN3Q15651 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGN3Q15651 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGN3Q15651 RNA5SP31-201ENST00000411144 127 ntBASIC3.05□□□□□ -1.92
HMGN3Q15651 AC007390.1-201ENST00000415722 356 ntBASIC3.05□□□□□ -1.92
HMGN3Q15651 YY1P1-201ENST00000427625 668 ntBASIC3.05□□□□□ -1.92
HMGN3Q15651 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGN3Q15651 OR4C10P-201ENST00000434991 931 ntBASIC3.05□□□□□ -1.92
HMGN3Q15651 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms