Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.31□□□□□ -1.88
FOXF1Q12946 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXF1Q12946 AC027281.1-201ENST00000574178 758 ntBASIC3.31□□□□□ -1.88
FOXF1Q12946 AC099489.2-201ENST00000574976 260 ntBASIC3.31□□□□□ -1.88
FOXF1Q12946 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
FOXF1Q12946 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.31□□□□□ -1.88
FOXF1Q12946 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
FOXF1Q12946 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
FOXF1Q12946 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
FOXF1Q12946 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
FOXF1Q12946 OR6C71P-202ENST00000641886 1107 ntBASIC3.31□□□□□ -1.88
FOXF1Q12946 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF1Q12946 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXF1Q12946 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
FOXF1Q12946 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF1Q12946 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
FOXF1Q12946 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
FOXF1Q12946 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXF1Q12946 SAGE2P-201ENST00000420011 2126 ntBASIC3.31□□□□□ -1.88
FOXF1Q12946 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF1Q12946 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXF1Q12946 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
FOXF1Q12946 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
FOXF1Q12946 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 TNPO1P3-201ENST00000436471 2662 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF1Q12946 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FOXF1Q12946 RNA5SP51-201ENST00000364750 119 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AC104297.1-201ENST00000393779 870 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 RPL21P17-201ENST00000397467 475 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF1Q12946 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 RWDD4P2-201ENST00000426392 563 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 AC018644.1-201ENST00000429934 551 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF1Q12946 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AC010307.1-201ENST00000467206 836 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 RWDD4P1-201ENST00000488019 565 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXF1Q12946 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXF1Q12946 MTCO1P49-201ENST00000523429 802 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 AC008489.1-201ENST00000524271 483 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXF1Q12946 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF1Q12946 AC022960.2-201ENST00000616300 666 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 AC244205.2-202ENST00000635781 342 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 MAPK10-372ENST00000641954 3413 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF1Q12946 ZNF285B-201ENST00000561698 1767 ntBASIC3.3□□□□□ -1.88
FOXF1Q12946 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF1Q12946 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXF1Q12946 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXF1Q12946 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXF1Q12946 MIR365B-201ENST00000362317 111 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXF1Q12946 ATP5A1P2-201ENST00000412323 255 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 BMS1P19-201ENST00000433925 393 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 RPS3AP46-201ENST00000448352 682 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXF1Q12946 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.29□□□□□ -1.88
FOXF1Q12946 MED28P5-201ENST00000528254 438 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXF1Q12946 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXF1Q12946 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXF1Q12946 AC068446.3-201ENST00000555285 382 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXF1Q12946 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXF1Q12946 OR6R2P-201ENST00000609216 300 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 AC039056.2-201ENST00000622261 511 ntBASIC3.29□□□□□ -1.88
FOXF1Q12946 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXF1Q12946 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXF1Q12946 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
FOXF1Q12946 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
FOXF1Q12946 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms