Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX4Q06945 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX4Q06945 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX4Q06945 OR11H4-201ENST00000315409 1082 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 RNU6-451P-201ENST00000362921 107 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 RN7SKP162-201ENST00000363605 345 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 RNU6-1322P-201ENST00000364309 107 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 RNU6-738P-201ENST00000384531 106 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 MIR606-201ENST00000384851 96 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 OR9R1P-201ENST00000412200 877 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC211486.3-201ENST00000412694 621 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC092634.6-201ENST00000418558 192 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 AL445669.1-201ENST00000426743 755 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AL365400.1-201ENST00000431854 640 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 LSM1P1-201ENST00000438629 273 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AL450996.1-201ENST00000445574 1202 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX4Q06945 MTND1P12-201ENST00000455231 147 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 RPS23P2-201ENST00000463671 415 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC017015.1-201ENST00000477387 286 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 RPS27P23-201ENST00000487608 251 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 RPS26P24-201ENST00000497656 331 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX4Q06945 RNU6-150P-201ENST00000516237 95 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 IGKV2-19-201ENST00000518132 283 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 OR8A2P-201ENST00000528631 952 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 AL163952.1-202ENST00000569625 600 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX4Q06945 AP001180.3-201ENST00000582221 145 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC090312.2-201ENST00000582687 378 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX4Q06945 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX4Q06945 CKS1BP3-201ENST00000600888 237 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC090607.5-201ENST00000615692 224 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 MIR6826-201ENST00000617808 98 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC068722.2-201ENST00000618734 544 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC241377.1-201ENST00000619797 406 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX4Q06945 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX4Q06945 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX4Q06945 AC025470.1-201ENST00000510053 2032 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 AC068769.1-201ENST00000474767 2426 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 PWAR1-201ENST00000624188 2414 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX4Q06945 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.09□□□□□ -1.43
SOX4Q06945 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX4Q06945 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
SOX4Q06945 MTCO1P9-201ENST00000505577 1534 ntBASIC6.09□□□□□ -1.44
SOX4Q06945 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX4Q06945 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.09□□□□□ -1.44
SOX4Q06945 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SOX4Q06945 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.09□□□□□ -1.44
SOX4Q06945 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX4Q06945 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX4Q06945 GNG5P1-201ENST00000255500 204 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 Y_RNA.132-201ENST00000363421 102 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 OR52E6-202ENST00000379946 954 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AL122016.1-201ENST00000403365 367 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC004987.3-201ENST00000413879 771 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 AL034379.1-201ENST00000423216 253 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 CRIP1P1-201ENST00000427567 185 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 RPL23AP4-201ENST00000427757 463 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 RPS27AP6-201ENST00000427962 448 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC133104.1-201ENST00000429100 218 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC073410.1-201ENST00000435125 589 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 AL513533.1-201ENST00000453728 415 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 MTCO1P42-201ENST00000457379 726 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 RN7SL547P-201ENST00000490793 290 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC106872.3-201ENST00000495104 446 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC006390.1-201ENST00000508068 283 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX4Q06945 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX4Q06945 Y_RNA.672-201ENST00000516289 104 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 RNU6-445P-201ENST00000516949 107 ntBASIC6.08□□□□□ -1.44
SOX4Q06945 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX4Q06945 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms