Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC103798.2-201ENST00000624292 632 ntBASIC2.22□□□□□ -2.05
RPS28P62857 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
RPS28P62857 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 RNA5SP507-201ENST00000363603 121 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RNU6-374P-201ENST00000364146 108 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RNA5SP379-201ENST00000364599 113 ntBASIC2.21□□□□□ -2.06
RPS28P62857 SNORA16A-201ENST00000384342 137 ntBASIC2.21□□□□□ -2.06
RPS28P62857 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RPS28P62857 RPS4XP3-201ENST00000398541 413 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AL079341.1-201ENST00000404701 1207 ntBASIC2.21□□□□□ -2.06
RPS28P62857 SNORD88.1-201ENST00000408684 91 ntBASIC2.21□□□□□ -2.06
RPS28P62857 MIR1179-201ENST00000408703 91 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RNU2-6P-201ENST00000411404 190 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC2.21□□□□□ -2.06
RPS28P62857 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.21□□□□□ -2.06
RPS28P62857 AC092447.6-201ENST00000414578 210 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS28P62857 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 AL096701.2-201ENST00000416920 238 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RPL21P32-201ENST00000419877 477 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC093107.1-201ENST00000422772 609 ntBASIC2.21□□□□□ -2.06
RPS28P62857 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS28P62857 SUMO1P4-201ENST00000429430 302 ntBASIC2.21□□□□□ -2.06
RPS28P62857 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS28P62857 AC006466.1-201ENST00000438721 289 ntBASIC2.21□□□□□ -2.06
RPS28P62857 ARL5AP3-201ENST00000439327 386 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC006011.1-201ENST00000442758 349 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RPL34P26-201ENST00000445636 354 ntBASIC2.21□□□□□ -2.06
RPS28P62857 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 EIF4EBP2P1-201ENST00000450009 343 ntBASIC2.21□□□□□ -2.06
RPS28P62857 VDAC2P4-201ENST00000452925 711 ntBASIC2.21□□□□□ -2.06
RPS28P62857 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS28P62857 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS28P62857 RN7SL587P-201ENST00000459853 281 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RN7SL75P-201ENST00000461926 281 ntBASIC2.21□□□□□ -2.06
RPS28P62857 RPS27AP9-201ENST00000477681 438 ntBASIC2.21□□□□□ -2.06
RPS28P62857 TRBV12-2-201ENST00000489763 344 ntBASIC2.21□□□□□ -2.06
RPS28P62857 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 NAMPTP2-201ENST00000505629 1115 ntBASIC2.21□□□□□ -2.06
RPS28P62857 MTND3P24-201ENST00000506306 329 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.21□□□□□ -2.06
RPS28P62857 APOOP4-201ENST00000513530 597 ntBASIC2.21□□□□□ -2.06
RPS28P62857 GMPSP1-201ENST00000514075 579 ntBASIC2.21□□□□□ -2.06
RPS28P62857 IGKV3D-25-201ENST00000519599 235 ntBASIC2.21□□□□□ -2.06
RPS28P62857 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC2.21□□□□□ -2.06
RPS28P62857 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 AC008562.1-201ENST00000521763 330 ntBASIC2.21□□□□□ -2.06
RPS28P62857 COX6B1P6-201ENST00000522347 255 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS28P62857 AC138701.1-201ENST00000524329 714 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 BMPR1APS2-201ENST00000527904 1012 ntBASIC2.21□□□□□ -2.06
RPS28P62857 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RPS28P62857 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.21□□□□□ -2.06
RPS28P62857 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 AC090751.1-201ENST00000566966 267 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 AC009163.5-201ENST00000575421 637 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 AC023043.3-201ENST00000593113 385 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC020915.5-201ENST00000596836 964 ntBASIC2.21□□□□□ -2.06
RPS28P62857 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC2.21□□□□□ -2.06
RPS28P62857 U73023.1-201ENST00000603134 700 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC019322.2-201ENST00000605634 147 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC084036.1-201ENST00000609190 508 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AC009570.1-201ENST00000609599 745 ntBASIC2.21□□□□□ -2.06
RPS28P62857 WBP1LP8-201ENST00000617401 327 ntBASIC2.21□□□□□ -2.06
RPS28P62857 AL022401.1-201ENST00000619498 108 ntBASIC2.21□□□□□ -2.06
RPS28P62857 LDHA-225ENST00000625635 141 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RPS28P62857 AC108206.1-201ENST00000570186 4159 ntBASIC2.21□□□□□ -2.06
RPS28P62857 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS28P62857 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS28P62857 AC006378.2-201ENST00000623178 2476 ntBASIC2.2□□□□□ -2.06
RPS28P62857 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPS28P62857 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPS28P62857 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPS28P62857 RNU1-70P-201ENST00000362618 164 ntBASIC2.2□□□□□ -2.06
RPS28P62857 U3.14-201ENST00000365363 227 ntBASIC2.2□□□□□ -2.06
RPS28P62857 RNA5SP131-201ENST00000365452 119 ntBASIC2.2□□□□□ -2.06
RPS28P62857 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
RPS28P62857 RNU4-31P-201ENST00000384211 141 ntBASIC2.2□□□□□ -2.06
RPS28P62857 MIR99A-201ENST00000384906 81 ntBASIC2.2□□□□□ -2.06
RPS28P62857 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPS28P62857 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPS28P62857 LSM5-202ENST00000409292 538 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 RNA5SP177-201ENST00000410122 107 ntBASIC2.2□□□□□ -2.06
RPS28P62857 RNU4-78P-201ENST00000410940 126 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms