Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF144AP50876 AC005592.1-201ENST00000566527 1640 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF144AP50876 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 AC011416.1-201ENST00000514947 1732 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
RNF144AP50876 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RNF144AP50876 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.27□□□□□ -1.41
RNF144AP50876 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RNF144AP50876 RNA5SP512-201ENST00000364550 120 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 SNORD116-11-201ENST00000383882 92 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 SNORA19-201ENST00000384737 128 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 MIR138-2-201ENST00000384916 84 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 UBE2V1P2-201ENST00000397758 440 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AL078604.1-201ENST00000404609 466 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 SOD1P1-201ENST00000407803 440 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AC099535.1-201ENST00000408928 371 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 RN7SKP121-201ENST00000410842 305 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF144AP50876 AL359265.2-201ENST00000434367 631 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AL161722.2-201ENST00000434731 981 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF144AP50876 AC004801.2-202ENST00000463559 283 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 UOX-201ENST00000471089 899 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 RN7SL382P-201ENST00000482631 282 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 DCAF13P2-201ENST00000514188 555 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF144AP50876 AC011979.2-201ENST00000527568 352 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 AL109628.1-201ENST00000556877 366 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF144AP50876 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 AC011477.5-201ENST00000586571 259 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 VN1R84P-201ENST00000593697 235 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF144AP50876 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.27□□□□□ -1.41
RNF144AP50876 AL354984.3-201ENST00000604803 325 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 AL122023.1-201ENST00000622847 530 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AL159972.1-201ENST00000625150 448 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RNF144AP50876 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 AC062029.1-202ENST00000606164 3651 ntBASIC6.27□□□□□ -1.41
RNF144AP50876 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RNF144AP50876 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF144AP50876 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF144AP50876 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF144AP50876 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RNF144AP50876 DHX40P1-201ENST00000588725 1412 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 CASC19-284ENST00000642142 1868 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RNF144AP50876 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF144AP50876 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RNF144AP50876 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 RNU6-874P-201ENST00000362390 105 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 RNA5SP333-201ENST00000363466 118 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 RNU6-593P-201ENST00000364716 112 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 RNA5SP334-201ENST00000364825 118 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF144AP50876 Y_RNA.396-201ENST00000383949 103 ntBASIC6.26□□□□□ -1.41
RNF144AP50876 RNU6-641P-201ENST00000384006 107 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms