Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF9P41273 OR7E13P-201ENST00000526052 910 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AC068446.3-201ENST00000555285 382 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 AC005972.3-201ENST00000606304 481 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 AL391497.1-201ENST00000608671 547 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 AL391834.1-201ENST00000609609 560 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AC004777.1-201ENST00000624317 287 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 OR5AC4P-202ENST00000642086 985 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF9P41273 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF9P41273 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF9P41273 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF9P41273 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TNFSF9P41273 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF9P41273 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF9P41273 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TNFSF9P41273 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TNFSF9P41273 AL451142.2-201ENST00000429076 2090 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF9P41273 MIR92A2-201ENST00000385299 75 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 RNA5SP424-201ENST00000390988 115 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 SYF2P2-201ENST00000417620 583 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 AC073464.3-201ENST00000422564 712 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 OR5AW1P-201ENST00000426334 1006 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 ATP5HP2-201ENST00000433885 485 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF9P41273 AC098824.1-201ENST00000453565 980 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 RNU6-1218P-201ENST00000458990 108 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 ATG10-AS1-201ENST00000504846 648 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 AC117525.1-201ENST00000515228 503 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.03□□□□□ -1.76
TNFSF9P41273 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
TNFSF9P41273 AC008739.3-201ENST00000603262 127 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 BRDTP1-201ENST00000605735 677 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 AC244100.1-202ENST00000621554 382 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 AC091905.1-201ENST00000624400 311 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.03□□□□□ -1.76
TNFSF9P41273 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF9P41273 AC114546.3-201ENST00000623582 1734 ntBASIC4.03□□□□□ -1.76
TNFSF9P41273 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TNFSF9P41273 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF9P41273 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TNFSF9P41273 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
TNFSF9P41273 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFSF9P41273 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TNFSF9P41273 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFSF9P41273 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFSF9P41273 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
TNFSF9P41273 SNORA70.4-201ENST00000365509 134 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 SNORA5A-201ENST00000384111 134 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 RNU6-532P-201ENST00000384318 107 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFSF9P41273 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.02□□□□□ -1.77
TNFSF9P41273 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFSF9P41273 RNA5SP44-201ENST00000410446 133 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 MTCO3P21-201ENST00000430791 643 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 ARL5AP3-201ENST00000439327 386 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFSF9P41273 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFSF9P41273 VN1R48P-201ENST00000448149 1036 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 PDCD5P1-201ENST00000543528 309 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 AC006960.3-201ENST00000561845 705 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFSF9P41273 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFSF9P41273 AC009237.17-201ENST00000618111 748 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFSF9P41273 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TNFSF9P41273 AL356121.2-201ENST00000624715 780 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 BMS1P21-201ENST00000634565 365 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 AC018555.1-201ENST00000567548 1980 ntBASIC4.02□□□□□ -1.77
TNFSF9P41273 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF9P41273 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFSF9P41273 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.01□□□□□ -1.77
TNFSF9P41273 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFSF9P41273 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFSF9P41273 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFSF9P41273 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFSF9P41273 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFSF9P41273 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFSF9P41273 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TNFSF9P41273 HIGD1AP12-201ENST00000427832 281 ntBASIC4.01□□□□□ -1.77
TNFSF9P41273 YME1L1P1-201ENST00000429435 297 ntBASIC4.01□□□□□ -1.77
TNFSF9P41273 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
TNFSF9P41273 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
TNFSF9P41273 YWHAQP9-201ENST00000445891 512 ntBASIC4.01□□□□□ -1.77
TNFSF9P41273 AC006480.1-201ENST00000449887 378 ntBASIC4.01□□□□□ -1.77
TNFSF9P41273 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFSF9P41273 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms