Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 RPL31P35-201ENST00000431058 377 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 HSPE1P28-201ENST00000443139 211 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC079922.1-201ENST00000443291 359 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC12P31275 FAM103A2P-201ENST00000444122 354 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 GAPDHP23-201ENST00000444823 993 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC12P31275 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 AC087879.1-201ENST00000474343 374 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC005726.1-201ENST00000494679 427 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 RPSAP51-201ENST00000497462 645 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 RN7SL284P-201ENST00000498823 275 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC008628.2-201ENST00000502605 298 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC12P31275 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 MTND1P35-201ENST00000526739 508 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC109635.3-201ENST00000529536 185 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC027544.3-201ENST00000535082 757 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 AL157687.1-201ENST00000554853 619 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AL512360.1-201ENST00000555346 234 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC007225.2-201ENST00000562529 256 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AL845331.3-202ENST00000562856 261 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC034268.2-201ENST00000571784 482 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC12P31275 AL049634.3-201ENST00000604968 457 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 Y_RNA.804-201ENST00000615262 101 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AL512652.1-201ENST00000619006 500 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AL445264.1-201ENST00000621719 171 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AL732618.1-201ENST00000623251 301 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC099654.5-201ENST00000636479 350 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HOXC12P31275 AL049780.3-201ENST00000624612 1583 ntBASIC5.4□□□□□ -1.55
HOXC12P31275 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXC12P31275 AP001541.1-201ENST00000623322 1904 ntBASIC5.4□□□□□ -1.55
HOXC12P31275 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXC12P31275 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXC12P31275 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HOXC12P31275 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC12P31275 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXC12P31275 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
HOXC12P31275 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC12P31275 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 SNORA21-201ENST00000362423 132 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 Y_RNA.46-201ENST00000362695 102 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 Y_RNA.89-201ENST00000363031 102 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 RNU6-1085P-201ENST00000363576 107 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXC12P31275 RNU6-1103P-201ENST00000384150 107 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 MT-TL1-201ENST00000386347 75 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 MRPL42P2-201ENST00000403169 426 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 RPS17P17-201ENST00000419392 409 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 MTCYBP45-201ENST00000435243 565 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 AL353662.1-201ENST00000439099 327 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 CBX1P1-201ENST00000440184 427 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AL022237.1-201ENST00000446663 358 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AC023141.9-201ENST00000458734 412 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 ACA64.1-201ENST00000459171 127 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 RN7SL352P-201ENST00000466002 277 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC083795.1-201ENST00000491760 320 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms