Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HSPA8P17-201ENST00000427029 1382 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 MIR513A2-201ENST00000385249 127 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 MTND4LP20-201ENST00000402379 270 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 COTL1P1-201ENST00000422309 375 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 RPL23AP69-201ENST00000431134 458 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A5P29400 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A5P29400 ELOCP8-201ENST00000439309 332 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 ELOCP15-201ENST00000442090 332 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 NPM1P39-201ENST00000449818 867 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A5P29400 MRPS35P3-201ENST00000603189 709 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 AC015802.5-201ENST00000607478 399 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 AC105227.2-201ENST00000615075 605 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A5P29400 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A5P29400 Z95331.1-201ENST00000623075 23112 ntBASIC4.14□□□□□ -1.75
COL4A5P29400 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A5P29400 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.14□□□□□ -1.75
COL4A5P29400 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A5P29400 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A5P29400 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A5P29400 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL4A5P29400 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A5P29400 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A5P29400 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A5P29400 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC138409.2-202ENST00000507274 458 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A5P29400 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.13□□□□□ -1.75
COL4A5P29400 MIR6715A-201ENST00000615929 79 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A5P29400 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A5P29400 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A5P29400 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
COL4A5P29400 Z83843.1-201ENST00000604070 3685 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL4A5P29400 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL4A5P29400 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A5P29400 UBE2V1P2-201ENST00000397758 440 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 MOB1AP1-201ENST00000430903 535 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 RPS20P1-201ENST00000434853 354 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A5P29400 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A5P29400 AC109925.1-201ENST00000478069 331 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC069306.1-201ENST00000507006 843 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A5P29400 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A5P29400 AC034105.3-201ENST00000565294 442 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC006023.1-201ENST00000603944 259 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.13□□□□□ -1.75
COL4A5P29400 AL157762.1-201ENST00000619612 415 ntBASIC4.13□□□□□ -1.75
COL4A5P29400 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.12□□□□□ -1.75
COL4A5P29400 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.12□□□□□ -1.75
COL4A5P29400 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
COL4A5P29400 AC092435.4-201ENST00000623012 4159 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A5P29400 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A5P29400 AP000542.2-201ENST00000623199 6179 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A5P29400 AC116096.1-201ENST00000566804 2314 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.12□□□□□ -1.75
COL4A5P29400 HMGN1P24-201ENST00000412282 298 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 AC107083.1-201ENST00000439643 279 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.12□□□□□ -1.75
COL4A5P29400 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.12□□□□□ -1.75
COL4A5P29400 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.12□□□□□ -1.75
COL4A5P29400 AL713922.2-201ENST00000619384 716 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 AC110801.1-201ENST00000623590 212 ntBASIC4.12□□□□□ -1.75
COL4A5P29400 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A5P29400 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A5P29400 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A5P29400 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A5P29400 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.11□□□□□ -1.75
COL4A5P29400 RNU1-108P-201ENST00000362556 161 ntBASIC4.11□□□□□ -1.75
COL4A5P29400 RSL24D1P1-201ENST00000404972 493 ntBASIC4.11□□□□□ -1.75
COL4A5P29400 RN7SL594P-201ENST00000470590 287 ntBASIC4.11□□□□□ -1.75
COL4A5P29400 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.11□□□□□ -1.75
COL4A5P29400 AC018442.3-201ENST00000523025 183 ntBASIC4.11□□□□□ -1.75
COL4A5P29400 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.11□□□□□ -1.75
COL4A5P29400 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.11□□□□□ -1.75
COL4A5P29400 KLKP1-201ENST00000595979 403 ntBASIC4.11□□□□□ -1.75
COL4A5P29400 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.11□□□□□ -1.75
COL4A5P29400 RNVU1-4-201ENST00000612985 164 ntBASIC4.11□□□□□ -1.75
COL4A5P29400 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A5P29400 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A5P29400 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A5P29400 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL4A5P29400 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 RPL5P18-201ENST00000406671 891 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 AL353705.1-201ENST00000433468 480 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 RPS29P31-201ENST00000446147 164 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A5P29400 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 RN7SKP209-201ENST00000516888 304 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A5P29400 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms