Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RXRBP28702 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RXRBP28702 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 HSPD1P8-201ENST00000400121 1658 ntBASIC6.74□□□□□ -1.33
RXRBP28702 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 AC093297.3-201ENST00000607056 2517 ntBASIC6.74□□□□□ -1.33
RXRBP28702 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 Y_RNA.38-201ENST00000362617 102 ntBASIC6.74□□□□□ -1.33
RXRBP28702 AL590762.2-201ENST00000395798 571 ntBASIC6.74□□□□□ -1.33
RXRBP28702 AC007068.1-201ENST00000396690 844 ntBASIC6.74□□□□□ -1.33
RXRBP28702 RNA5SP80-201ENST00000410475 111 ntBASIC6.74□□□□□ -1.33
RXRBP28702 HMGB3P31-201ENST00000413333 595 ntBASIC6.74□□□□□ -1.33
RXRBP28702 AL139413.1-201ENST00000421309 217 ntBASIC6.74□□□□□ -1.33
RXRBP28702 RIMKLBP2-201ENST00000424737 654 ntBASIC6.74□□□□□ -1.33
RXRBP28702 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 MTATP6P30-201ENST00000443540 664 ntBASIC6.74□□□□□ -1.33
RXRBP28702 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 COX6CP12-201ENST00000446748 202 ntBASIC6.74□□□□□ -1.33
RXRBP28702 OR6C5P-201ENST00000452388 923 ntBASIC6.74□□□□□ -1.33
RXRBP28702 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 DDX39BP2-208ENST00000453923 258 ntBASIC6.74□□□□□ -1.33
RXRBP28702 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 CDC42P1-201ENST00000456658 548 ntBASIC6.74□□□□□ -1.33
RXRBP28702 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 AC123904.3-201ENST00000547218 814 ntBASIC6.74□□□□□ -1.33
RXRBP28702 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.74□□□□□ -1.33
RXRBP28702 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.74□□□□□ -1.33
RXRBP28702 CYP2C60P-201ENST00000566088 139 ntBASIC6.74□□□□□ -1.33
RXRBP28702 BPTFP1-201ENST00000579209 492 ntBASIC6.74□□□□□ -1.33
RXRBP28702 AL592494.3-201ENST00000609485 464 ntBASIC6.74□□□□□ -1.33
RXRBP28702 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.74□□□□□ -1.33
RXRBP28702 LRRC77P-213ENST00000637727 880 ntBASIC6.74□□□□□ -1.33
RXRBP28702 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.74□□□□□ -1.33
RXRBP28702 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 MTCO1P18-201ENST00000455518 1419 ntBASIC6.74□□□□□ -1.33
RXRBP28702 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.74□□□□□ -1.33
RXRBP28702 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RXRBP28702 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 AC005539.1-201ENST00000443768 1479 ntBASIC6.73□□□□□ -1.33
RXRBP28702 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 AC006511.3-201ENST00000624929 1783 ntBASIC6.73□□□□□ -1.33
RXRBP28702 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 SCARNA15-201ENST00000607520 4325 ntBASIC6.73□□□□□ -1.33
RXRBP28702 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RXRBP28702 RNU6-692P-201ENST00000384496 107 ntBASIC6.73□□□□□ -1.33
RXRBP28702 RNU6-253P-201ENST00000384730 105 ntBASIC6.73□□□□□ -1.33
RXRBP28702 SNORD65-201ENST00000391079 73 ntBASIC6.73□□□□□ -1.33
RXRBP28702 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RXRBP28702 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 EEF1A1P40-201ENST00000412883 573 ntBASIC6.73□□□□□ -1.33
RXRBP28702 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.73□□□□□ -1.33
RXRBP28702 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.73□□□□□ -1.33
RXRBP28702 BTF3P10-201ENST00000433415 495 ntBASIC6.73□□□□□ -1.33
RXRBP28702 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RXRBP28702 AL591363.1-201ENST00000450091 483 ntBASIC6.73□□□□□ -1.33
RXRBP28702 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 AC098824.1-201ENST00000453565 980 ntBASIC6.73□□□□□ -1.33
RXRBP28702 DNAJC19P1-201ENST00000455312 319 ntBASIC6.73□□□□□ -1.33
RXRBP28702 RPS20P4-201ENST00000461659 355 ntBASIC6.73□□□□□ -1.33
RXRBP28702 AC072039.1-201ENST00000477611 581 ntBASIC6.73□□□□□ -1.33
RXRBP28702 MTCYBP18-201ENST00000501056 747 ntBASIC6.73□□□□□ -1.33
RXRBP28702 TOMM22P4-201ENST00000511318 336 ntBASIC6.73□□□□□ -1.33
RXRBP28702 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.73□□□□□ -1.33
RXRBP28702 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.73□□□□□ -1.33
RXRBP28702 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.73□□□□□ -1.33
RXRBP28702 AC090948.2-201ENST00000607363 564 ntBASIC6.73□□□□□ -1.33
RXRBP28702 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.73□□□□□ -1.33
RXRBP28702 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.73□□□□□ -1.33
RXRBP28702 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms