Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
POLR2AP24928 HSPE1P23-201ENST00000509838 286 ntBASIC5.23□□□□□ -1.57
POLR2AP24928 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.23□□□□□ -1.57
POLR2AP24928 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.23□□□□□ -1.57
POLR2AP24928 AL163642.2-201ENST00000604722 1019 ntBASIC5.23□□□□□ -1.57
POLR2AP24928 MIR8059-201ENST00000620427 81 ntBASIC5.23□□□□□ -1.57
POLR2AP24928 AC022509.4-201ENST00000621404 572 ntBASIC5.23□□□□□ -1.57
POLR2AP24928 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.23□□□□□ -1.57
POLR2AP24928 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.23□□□□□ -1.57
POLR2AP24928 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
POLR2AP24928 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
POLR2AP24928 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
POLR2AP24928 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
POLR2AP24928 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
POLR2AP24928 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
POLR2AP24928 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
POLR2AP24928 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 PTMAP2-201ENST00000397627 327 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 RNU6-920P-201ENST00000410926 92 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.22□□□□□ -1.57
POLR2AP24928 ZNF863P-201ENST00000426746 417 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 YME1L1P1-201ENST00000429435 297 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 NEK4P1-201ENST00000433383 879 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 RPS24P1-201ENST00000438550 371 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.22□□□□□ -1.57
POLR2AP24928 AL162151.2-201ENST00000448875 158 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 AL359385.1-201ENST00000456509 365 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 SRRM1P2-201ENST00000464531 1192 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 LTV1P1-201ENST00000510683 1237 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC136619.2-201ENST00000563361 631 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AP000403.1-201ENST00000603349 851 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 RNU4-89P-201ENST00000607443 133 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC017083.3-201ENST00000609955 700 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC015804.1-201ENST00000622935 435 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC099654.13-201ENST00000639774 207 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 MTND5P11-201ENST00000511037 1812 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
POLR2AP24928 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.22□□□□□ -1.57
POLR2AP24928 RNU1-132P-201ENST00000364300 164 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 Y_RNA.517-201ENST00000384551 106 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.22□□□□□ -1.57
POLR2AP24928 GSTA12P-201ENST00000402398 508 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 U3.35-201ENST00000408405 208 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 RNA5SP36-201ENST00000410197 133 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 ARAFP1-201ENST00000422172 605 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AL354766.1-201ENST00000423396 542 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 COX6B1P7-201ENST00000430845 235 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 KCTD9P2-201ENST00000512203 1013 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC099522.1-202ENST00000514718 367 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 HNRNPKP5-201ENST00000515300 253 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.22□□□□□ -1.57
POLR2AP24928 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.22□□□□□ -1.57
POLR2AP24928 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.22□□□□□ -1.57
POLR2AP24928 AL606834.2-201ENST00000602954 668 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 QTRT1P1-201ENST00000604344 1078 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC106791.2-201ENST00000604680 391 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC013468.1-201ENST00000608680 598 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 OR2BH1P-201ENST00000608850 864 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC099669.2-201ENST00000616549 437 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 AP000648.2-201ENST00000624182 404 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 AC067931.1-201ENST00000624190 671 ntBASIC5.22□□□□□ -1.57
POLR2AP24928 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
POLR2AP24928 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.21□□□□□ -1.57
POLR2AP24928 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.21□□□□□ -1.57
POLR2AP24928 BX005019.1-201ENST00000561881 1810 ntBASIC5.21□□□□□ -1.57
POLR2AP24928 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
POLR2AP24928 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
POLR2AP24928 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
POLR2AP24928 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.21□□□□□ -1.57
POLR2AP24928 AC093297.3-201ENST00000607056 2517 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms