Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ARL2BPP3-201ENST00000421226 480 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.04□□□□□ -1.76
XRCC1P18887 AL356276.2-201ENST00000435919 558 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 MED6P1-201ENST00000439659 713 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.04□□□□□ -1.76
XRCC1P18887 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.04□□□□□ -1.76
XRCC1P18887 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 HMGB1P16-201ENST00000447155 540 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 AC092685.1-201ENST00000447960 1243 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 RAD23BP3-201ENST00000454157 1152 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
XRCC1P18887 AC007688.1-201ENST00000475592 759 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
XRCC1P18887 RPL31P61-201ENST00000496160 376 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 HPRT1P2-201ENST00000505250 544 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 IGLVIV-53-201ENST00000520107 367 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 AC135001.1-201ENST00000544546 283 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 VN1R85P-201ENST00000601587 426 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 AP001033.2-201ENST00000609701 1003 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 AC024941.1-201ENST00000612250 334 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 AL162574.2-201ENST00000614618 657 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 MIR7702-201ENST00000621931 59 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.04□□□□□ -1.76
XRCC1P18887 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
XRCC1P18887 AC024341.1-201ENST00000526444 1552 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.04□□□□□ -1.76
XRCC1P18887 GTF2H2B-203ENST00000508065 1432 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 AC092162.3-201ENST00000624511 1624 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.03□□□□□ -1.76
XRCC1P18887 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
XRCC1P18887 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.76
XRCC1P18887 AC116667.1-201ENST00000604855 2072 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RN7SKP44-201ENST00000363602 316 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RNU6-317P-201ENST00000384031 107 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RNU6-146P-201ENST00000384602 108 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AC010385.1-201ENST00000412374 256 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 XKRYP4-201ENST00000414395 483 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.03□□□□□ -1.76
XRCC1P18887 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
XRCC1P18887 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
XRCC1P18887 AC009965.2-201ENST00000425328 970 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 NPM1P24-201ENST00000428039 894 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 FO393419.3-201ENST00000428741 282 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 MTCO1P54-201ENST00000430139 712 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AL031663.1-201ENST00000437445 219 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 CBX1P4-201ENST00000439415 457 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AL356535.1-201ENST00000440335 398 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
XRCC1P18887 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 XKRYP5-201ENST00000449659 483 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RPL38P1-201ENST00000460914 211 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RPL7P1-201ENST00000468161 747 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 RPL7P9-201ENST00000468715 747 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 S100A11P1-201ENST00000477525 312 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AC069499.1-201ENST00000489433 509 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AC111193.1-201ENST00000504097 155 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AC108064.1-201ENST00000513791 460 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 SNORA31.13-201ENST00000516624 135 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 IGKV2-38-201ENST00000517443 247 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 AC063950.1-201ENST00000552036 308 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.03□□□□□ -1.76
XRCC1P18887 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 AC079610.2-201ENST00000604818 690 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.03□□□□□ -1.76
XRCC1P18887 MIR7151-201ENST00000617477 60 ntBASIC4.03□□□□□ -1.76
XRCC1P18887 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
XRCC1P18887 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
XRCC1P18887 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
XRCC1P18887 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.02□□□□□ -1.77
XRCC1P18887 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
XRCC1P18887 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
XRCC1P18887 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.02□□□□□ -1.77
XRCC1P18887 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.02□□□□□ -1.77
XRCC1P18887 MIR372-201ENST00000362225 67 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
XRCC1P18887 RNU11-4P-201ENST00000391149 133 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 AL590290.1-201ENST00000405336 380 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms