Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTLA4P16410 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CTLA4P16410 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.3□□□□□ -1.88
CTLA4P16410 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 AC024560.2-201ENST00000507981 1497 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 SYT14P1-202ENST00000600441 1448 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.29□□□□□ -1.88
CTLA4P16410 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CTLA4P16410 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 AL627171.1-201ENST00000618845 1308 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AL118496.1-201ENST00000440201 1812 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 RNU6-1251P-201ENST00000364502 107 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AC240504.1-201ENST00000395709 845 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 RNA5SP239-201ENST00000410218 129 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 RNU6-628P-201ENST00000410675 107 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.29□□□□□ -1.88
CTLA4P16410 AC004975.1-201ENST00000428733 208 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 MTCO3P16-201ENST00000454456 754 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 EIF2S2P4-201ENST00000461070 984 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.29□□□□□ -1.88
CTLA4P16410 AL121576.1-201ENST00000556055 276 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 RN7SL703P-201ENST00000578485 302 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 AC053481.4-201ENST00000583164 216 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 FAM60CP-201ENST00000591086 664 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 AL049844.2-201ENST00000604280 628 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.29□□□□□ -1.88
CTLA4P16410 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
CTLA4P16410 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CTLA4P16410 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTLA4P16410 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CTLA4P16410 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CTLA4P16410 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 MIR30B-201ENST00000384850 88 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AL391417.1-201ENST00000404100 426 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.28□□□□□ -1.88
CTLA4P16410 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.28□□□□□ -1.88
CTLA4P16410 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.28□□□□□ -1.88
CTLA4P16410 RN7SKP177-201ENST00000410567 355 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.28□□□□□ -1.88
CTLA4P16410 AC009965.2-201ENST00000425328 970 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.28□□□□□ -1.88
CTLA4P16410 AL591419.1-201ENST00000427423 339 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.28□□□□□ -1.88
CTLA4P16410 MTCYBP29-201ENST00000436327 1006 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.28□□□□□ -1.88
CTLA4P16410 NUTF2P7-201ENST00000453086 375 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AC099563.1-201ENST00000456086 418 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.28□□□□□ -1.88
CTLA4P16410 AC022034.3-201ENST00000471393 478 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.28□□□□□ -1.88
CTLA4P16410 MTCO3P42-201ENST00000509488 518 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 MTCO3P39-201ENST00000514812 518 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.28□□□□□ -1.88
CTLA4P16410 OR8R1P-201ENST00000543943 764 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AL121766.1-201ENST00000547436 487 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.28□□□□□ -1.88
CTLA4P16410 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.28□□□□□ -1.88
CTLA4P16410 AC005344.1-201ENST00000613391 459 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 MIR6810-201ENST00000622701 70 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.28□□□□□ -1.88
CTLA4P16410 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTLA4P16410 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.28□□□□□ -1.88
CTLA4P16410 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
CTLA4P16410 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTLA4P16410 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.27□□□□□ -1.89
CTLA4P16410 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTLA4P16410 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTLA4P16410 AL031985.3-201ENST00000565390 2449 ntBASIC3.27□□□□□ -1.89
CTLA4P16410 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTLA4P16410 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms