Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.93□□□□□ -1.46
CFTRP13569 AL121766.1-201ENST00000547436 487 ntBASIC5.93□□□□□ -1.46
CFTRP13569 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.93□□□□□ -1.46
CFTRP13569 AL121594.4-201ENST00000556211 1196 ntBASIC5.93□□□□□ -1.46
CFTRP13569 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.93□□□□□ -1.46
CFTRP13569 AC092868.3-201ENST00000560515 784 ntBASIC5.93□□□□□ -1.46
CFTRP13569 AC015802.5-201ENST00000607478 399 ntBASIC5.93□□□□□ -1.46
CFTRP13569 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.93□□□□□ -1.46
CFTRP13569 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.93□□□□□ -1.46
CFTRP13569 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CFTRP13569 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CFTRP13569 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CFTRP13569 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CFTRP13569 MTND4LP20-201ENST00000402379 270 ntBASIC5.92□□□□□ -1.46
CFTRP13569 AL603766.1-201ENST00000407763 664 ntBASIC5.92□□□□□ -1.46
CFTRP13569 RNA5SP80-201ENST00000410475 111 ntBASIC5.92□□□□□ -1.46
CFTRP13569 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.92□□□□□ -1.46
CFTRP13569 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.92□□□□□ -1.46
CFTRP13569 RPS20P1-201ENST00000434853 354 ntBASIC5.92□□□□□ -1.46
CFTRP13569 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.92□□□□□ -1.46
CFTRP13569 RPL7P48-201ENST00000461513 746 ntBASIC5.92□□□□□ -1.46
CFTRP13569 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.92□□□□□ -1.46
CFTRP13569 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.92□□□□□ -1.46
CFTRP13569 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.92□□□□□ -1.46
CFTRP13569 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.92□□□□□ -1.46
CFTRP13569 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.92□□□□□ -1.46
CFTRP13569 AC010653.1-201ENST00000571108 881 ntBASIC5.92□□□□□ -1.46
CFTRP13569 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.92□□□□□ -1.46
CFTRP13569 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CFTRP13569 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.92□□□□□ -1.46
CFTRP13569 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CFTRP13569 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CFTRP13569 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CFTRP13569 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CFTRP13569 RNA5SP42-201ENST00000364278 115 ntBASIC5.91□□□□□ -1.46
CFTRP13569 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.91□□□□□ -1.46
CFTRP13569 RNA5SP146-201ENST00000410743 123 ntBASIC5.91□□□□□ -1.46
CFTRP13569 RPL12P46-201ENST00000436610 195 ntBASIC5.91□□□□□ -1.46
CFTRP13569 ELOCP8-201ENST00000439309 332 ntBASIC5.91□□□□□ -1.46
CFTRP13569 ELOCP15-201ENST00000442090 332 ntBASIC5.91□□□□□ -1.46
CFTRP13569 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.91□□□□□ -1.46
CFTRP13569 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CFTRP13569 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.91□□□□□ -1.46
CFTRP13569 RPL12P50-201ENST00000603116 116 ntBASIC5.91□□□□□ -1.46
CFTRP13569 RNVU1-4-201ENST00000612985 164 ntBASIC5.91□□□□□ -1.46
CFTRP13569 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
CFTRP13569 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.91□□□□□ -1.46
CFTRP13569 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CFTRP13569 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CFTRP13569 RNU1-18P-201ENST00000363062 164 ntBASIC5.9□□□□□ -1.46
CFTRP13569 RN7SKP284-201ENST00000411002 343 ntBASIC5.9□□□□□ -1.46
CFTRP13569 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.9□□□□□ -1.46
CFTRP13569 RNU6-513P-201ENST00000516104 104 ntBASIC5.9□□□□□ -1.46
CFTRP13569 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.9□□□□□ -1.46
CFTRP13569 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CFTRP13569 AC091905.1-201ENST00000624400 311 ntBASIC5.9□□□□□ -1.46
CFTRP13569 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.9□□□□□ -1.46
CFTRP13569 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.9□□□□□ -1.46
CFTRP13569 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.9□□□□□ -1.46
CFTRP13569 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CFTRP13569 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CFTRP13569 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CFTRP13569 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CFTRP13569 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CFTRP13569 HSPA8P19-201ENST00000505359 1517 ntBASIC5.9□□□□□ -1.47
CFTRP13569 HMGN1P24-201ENST00000412282 298 ntBASIC5.9□□□□□ -1.47
CFTRP13569 ATP5HP2-201ENST00000433885 485 ntBASIC5.9□□□□□ -1.47
CFTRP13569 AC021678.1-201ENST00000505195 936 ntBASIC5.9□□□□□ -1.47
CFTRP13569 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.9□□□□□ -1.47
CFTRP13569 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.9□□□□□ -1.47
CFTRP13569 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.9□□□□□ -1.47
CFTRP13569 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CFTRP13569 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CFTRP13569 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.89□□□□□ -1.47
CFTRP13569 Z95331.1-201ENST00000623075 23112 ntBASIC5.89□□□□□ -1.47
CFTRP13569 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CFTRP13569 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.89□□□□□ -1.47
CFTRP13569 TNPO1P3-201ENST00000436471 2662 ntBASIC5.89□□□□□ -1.47
CFTRP13569 HSPA8P17-201ENST00000427029 1382 ntBASIC5.89□□□□□ -1.47
CFTRP13569 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CFTRP13569 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.89□□□□□ -1.47
CFTRP13569 AC068254.2-201ENST00000623938 3577 ntBASIC5.89□□□□□ -1.47
CFTRP13569 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CFTRP13569 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.89□□□□□ -1.47
CFTRP13569 RNU6-301P-201ENST00000384277 107 ntBASIC5.89□□□□□ -1.47
CFTRP13569 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CFTRP13569 AL160175.1-201ENST00000428124 247 ntBASIC5.89□□□□□ -1.47
CFTRP13569 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.89□□□□□ -1.47
CFTRP13569 RPS27AP1-201ENST00000475545 471 ntBASIC5.89□□□□□ -1.47
CFTRP13569 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.89□□□□□ -1.47
CFTRP13569 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CFTRP13569 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CFTRP13569 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CFTRP13569 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CFTRP13569 NACA3P-201ENST00000359690 648 ntBASIC5.88□□□□□ -1.47
CFTRP13569 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.88□□□□□ -1.47
CFTRP13569 AC006028.1-201ENST00000438379 402 ntBASIC5.88□□□□□ -1.47
CFTRP13569 ATP5C1P1-201ENST00000441945 895 ntBASIC5.88□□□□□ -1.47
CFTRP13569 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.88□□□□□ -1.47
CFTRP13569 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms