Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 AL078601.3-201ENST00000573303 535 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 MIR4701-201ENST00000583094 63 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC119403.2-201ENST00000590960 598 ntBASIC6.32□□□□□ -1.4
RARAP10276 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 AC011500.1-201ENST00000601963 469 ntBASIC6.32□□□□□ -1.4
RARAP10276 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 AC010149.2-201ENST00000637608 315 ntBASIC6.32□□□□□ -1.4
RARAP10276 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 AL355488.2-201ENST00000609909 2850 ntBASIC6.32□□□□□ -1.4
RARAP10276 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 MTND5P16-201ENST00000460269 1703 ntBASIC6.31□□□□□ -1.4
RARAP10276 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 RPL7P26-201ENST00000333817 754 ntBASIC6.31□□□□□ -1.4
RARAP10276 RN7SKP250-201ENST00000363924 321 ntBASIC6.31□□□□□ -1.4
RARAP10276 SNORD42.2-201ENST00000365570 69 ntBASIC6.31□□□□□ -1.4
RARAP10276 RNU6-317P-201ENST00000384031 107 ntBASIC6.31□□□□□ -1.4
RARAP10276 RNU6-474P-201ENST00000384243 107 ntBASIC6.31□□□□□ -1.4
RARAP10276 RNU6-952P-201ENST00000391164 108 ntBASIC6.31□□□□□ -1.4
RARAP10276 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 BTBD10P2-201ENST00000404779 676 ntBASIC6.31□□□□□ -1.4
RARAP10276 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.31□□□□□ -1.4
RARAP10276 RPL35AP31-201ENST00000418340 337 ntBASIC6.31□□□□□ -1.4
RARAP10276 MTCYBP8-201ENST00000422855 651 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 ATP5JP1-201ENST00000431631 322 ntBASIC6.31□□□□□ -1.4
RARAP10276 AL627308.1-201ENST00000435693 821 ntBASIC6.31□□□□□ -1.4
RARAP10276 GAPDHP59-201ENST00000435908 267 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC006335.2-201ENST00000437993 330 ntBASIC6.31□□□□□ -1.4
RARAP10276 HMGB1P18-201ENST00000438801 619 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC073909.1-201ENST00000447112 999 ntBASIC6.31□□□□□ -1.4
RARAP10276 MRPS17P3-201ENST00000465453 385 ntBASIC6.31□□□□□ -1.4
RARAP10276 RN7SL836P-201ENST00000476140 296 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC044810.1-201ENST00000480271 711 ntBASIC6.31□□□□□ -1.4
RARAP10276 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 RPL23AP40-201ENST00000487630 390 ntBASIC6.31□□□□□ -1.4
RARAP10276 TRBV5-2-201ENST00000489095 273 ntBASIC6.31□□□□□ -1.4
RARAP10276 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 RN7SL284P-201ENST00000498823 275 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 GAPDHP56-201ENST00000506031 988 ntBASIC6.31□□□□□ -1.4
RARAP10276 RNA5SP441-201ENST00000516809 88 ntBASIC6.31□□□□□ -1.4
RARAP10276 IGKV2-36-201ENST00000519999 223 ntBASIC6.31□□□□□ -1.4
RARAP10276 PMS2P3-207ENST00000529061 717 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.31□□□□□ -1.4
RARAP10276 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.31□□□□□ -1.4
RARAP10276 MRPS21P8-201ENST00000569196 235 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC090312.1-201ENST00000580637 348 ntBASIC6.31□□□□□ -1.4
RARAP10276 MIR4742-201ENST00000581069 85 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC136443.5-201ENST00000603741 370 ntBASIC6.31□□□□□ -1.4
RARAP10276 SNRPGP17-201ENST00000603780 214 ntBASIC6.31□□□□□ -1.4
RARAP10276 BX664608.1-201ENST00000610519 487 ntBASIC6.31□□□□□ -1.4
RARAP10276 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC104237.2-201ENST00000612456 443 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC093913.1-201ENST00000614178 329 ntBASIC6.31□□□□□ -1.4
RARAP10276 RFPL4AP6-201ENST00000616792 846 ntBASIC6.31□□□□□ -1.4
RARAP10276 AC021106.3-201ENST00000623925 531 ntBASIC6.31□□□□□ -1.4
RARAP10276 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.31□□□□□ -1.4
RARAP10276 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.31□□□□□ -1.4
RARAP10276 AC005224.3-201ENST00000584683 2140 ntBASIC6.31□□□□□ -1.4
RARAP10276 MTND5P1-201ENST00000445440 1375 ntBASIC6.31□□□□□ -1.4
RARAP10276 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RARAP10276 MTND4P35-201ENST00000604257 1375 ntBASIC6.31□□□□□ -1.4
RARAP10276 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.31□□□□□ -1.4
RARAP10276 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RARAP10276 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RARAP10276 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms