Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TPM1P09493 MIR192-201ENST00000384915 110 ntBASIC4.19□□□□□ -1.74
TPM1P09493 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TPM1P09493 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM1P09493 RPS4XP9-201ENST00000405151 780 ntBASIC4.19□□□□□ -1.74
TPM1P09493 RN7SKP33-201ENST00000410942 340 ntBASIC4.19□□□□□ -1.74
TPM1P09493 SNORA57.3-201ENST00000411095 141 ntBASIC4.19□□□□□ -1.74
TPM1P09493 PRELID3BP11-201ENST00000414230 479 ntBASIC4.19□□□□□ -1.74
TPM1P09493 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.19□□□□□ -1.74
TPM1P09493 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.19□□□□□ -1.74
TPM1P09493 AC084198.1-201ENST00000477747 402 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AL049830.2-201ENST00000480072 201 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.19□□□□□ -1.74
TPM1P09493 ACTR6P1-201ENST00000514311 1104 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM1P09493 AC138701.1-201ENST00000524329 714 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM1P09493 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM1P09493 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM1P09493 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM1P09493 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.19□□□□□ -1.74
TPM1P09493 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM1P09493 AL354760.1-201ENST00000608357 643 ntBASIC4.19□□□□□ -1.74
TPM1P09493 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM1P09493 AC005021.1-201ENST00000608730 355 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC116651.1-201ENST00000609724 556 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC055764.2-201ENST00000610089 670 ntBASIC4.19□□□□□ -1.74
TPM1P09493 Mico1.1-201ENST00000611698 204 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AC114781.5-201ENST00000615297 108 ntBASIC4.19□□□□□ -1.74
TPM1P09493 AL121890.3-201ENST00000618494 516 ntBASIC4.19□□□□□ -1.74
TPM1P09493 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TPM1P09493 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM1P09493 AL359715.4-201ENST00000606629 1436 ntBASIC4.19□□□□□ -1.74
TPM1P09493 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TPM1P09493 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TPM1P09493 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
TPM1P09493 OTUD4P1-201ENST00000237841 3067 ntBASIC4.18□□□□□ -1.74
TPM1P09493 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM1P09493 AL353743.4-201ENST00000422653 1547 ntBASIC4.18□□□□□ -1.74
TPM1P09493 RNA5SP97-201ENST00000365006 84 ntBASIC4.18□□□□□ -1.74
TPM1P09493 U1.1-201ENST00000384101 164 ntBASIC4.18□□□□□ -1.74
TPM1P09493 MIR199A2-201ENST00000385289 110 ntBASIC4.18□□□□□ -1.74
TPM1P09493 MTCO3P31-201ENST00000405526 789 ntBASIC4.18□□□□□ -1.74
TPM1P09493 FAR2P4-202ENST00000425399 584 ntBASIC4.18□□□□□ -1.74
TPM1P09493 ELOCP6-201ENST00000429066 328 ntBASIC4.18□□□□□ -1.74
TPM1P09493 ARF4P2-201ENST00000430209 526 ntBASIC4.18□□□□□ -1.74
TPM1P09493 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.18□□□□□ -1.74
TPM1P09493 MRPL50P1-201ENST00000431951 384 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AL353898.1-201ENST00000444055 238 ntBASIC4.18□□□□□ -1.74
TPM1P09493 HMGB3P8-201ENST00000449709 577 ntBASIC4.18□□□□□ -1.74
TPM1P09493 C1DP3-201ENST00000455013 423 ntBASIC4.18□□□□□ -1.74
TPM1P09493 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM1P09493 ELOCP12-201ENST00000458706 328 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AC104629.2-201ENST00000468627 598 ntBASIC4.18□□□□□ -1.74
TPM1P09493 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM1P09493 AC091167.1-201ENST00000492017 396 ntBASIC4.18□□□□□ -1.74
TPM1P09493 MTATP6P22-201ENST00000507369 598 ntBASIC4.18□□□□□ -1.74
TPM1P09493 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM1P09493 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 RN7SKP82-201ENST00000516786 223 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM1P09493 OR4A2P-201ENST00000527276 913 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM1P09493 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM1P09493 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM1P09493 MIR4738-201ENST00000579134 87 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AC011492.1-201ENST00000600023 315 ntBASIC4.18□□□□□ -1.74
TPM1P09493 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.18□□□□□ -1.74
TPM1P09493 AL021707.7-201ENST00000607991 416 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AC023043.4-201ENST00000612081 449 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM1P09493 AC092628.2-201ENST00000622492 339 ntBASIC4.18□□□□□ -1.74
TPM1P09493 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM1P09493 CR392039.4-201ENST00000624968 501 ntBASIC4.18□□□□□ -1.74
TPM1P09493 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.18□□□□□ -1.74
TPM1P09493 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.18□□□□□ -1.74
TPM1P09493 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TPM1P09493 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM1P09493 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM1P09493 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TPM1P09493 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.17□□□□□ -1.74
TPM1P09493 CCNB2P1-201ENST00000399411 1150 ntBASIC4.17□□□□□ -1.74
TPM1P09493 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
TPM1P09493 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM1P09493 RPL31P45-201ENST00000419532 356 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AL691449.1-201ENST00000426570 421 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AC023141.6-201ENST00000429418 337 ntBASIC4.17□□□□□ -1.74
TPM1P09493 MTCO1P52-201ENST00000433928 531 ntBASIC4.17□□□□□ -1.74
TPM1P09493 CBX1P4-201ENST00000439415 457 ntBASIC4.17□□□□□ -1.74
TPM1P09493 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM1P09493 RN7SL330P-201ENST00000469709 307 ntBASIC4.17□□□□□ -1.74
TPM1P09493 RPS3AP6-201ENST00000484430 795 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms