Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC105402.1-201ENST00000413336 545 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 MTND4LP14-201ENST00000429447 288 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 FTH1P6-201ENST00000430768 320 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.36□□□□□ -1.71
CHRNA1P02708 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.36□□□□□ -1.71
CHRNA1P02708 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 AP000926.1-201ENST00000479573 241 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 OR9N1P-202ENST00000494289 481 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 SUMO1P1-201ENST00000497904 306 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 AC010627.1-201ENST00000503819 1294 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.36□□□□□ -1.71
CHRNA1P02708 AC008694.2-201ENST00000517591 306 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.36□□□□□ -1.71
CHRNA1P02708 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.36□□□□□ -1.71
CHRNA1P02708 CCNG2P1-201ENST00000549521 1000 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.36□□□□□ -1.71
CHRNA1P02708 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.36□□□□□ -1.71
CHRNA1P02708 MIR4458-201ENST00000578872 75 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 MIR432-201ENST00000606207 94 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 AC012467.1-201ENST00000607740 256 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 AC244100.1-202ENST00000621554 382 ntBASIC4.36□□□□□ -1.71
CHRNA1P02708 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CHRNA1P02708 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
CHRNA1P02708 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA1P02708 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CHRNA1P02708 ZNF285B-201ENST00000561698 1767 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CHRNA1P02708 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 RNU6-883P-201ENST00000384597 107 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 GSTM3P2-201ENST00000412746 530 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 Z97055.1-201ENST00000419730 712 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 NPM1P34-201ENST00000428821 893 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.35□□□□□ -1.71
CHRNA1P02708 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA1P02708 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA1P02708 AC239809.1-201ENST00000450470 217 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA1P02708 HMGB1P26-201ENST00000452520 628 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 FABP3P2-201ENST00000453169 399 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 AC025181.1-201ENST00000477507 416 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 PPIAP15-201ENST00000479662 484 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 RNU6-362P-201ENST00000516736 90 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.35□□□□□ -1.71
CHRNA1P02708 AC087499.8-201ENST00000578406 226 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA1P02708 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.35□□□□□ -1.71
CHRNA1P02708 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.35□□□□□ -1.71
CHRNA1P02708 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA1P02708 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 AC096656.1-201ENST00000623826 1364 ntBASIC4.35□□□□□ -1.71
CHRNA1P02708 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.35□□□□□ -1.71
CHRNA1P02708 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA1P02708 AC068254.2-201ENST00000623938 3577 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CHRNA1P02708 OR5T3-201ENST00000303059 1023 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CHRNA1P02708 RNA5SP52-201ENST00000362448 134 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 RNA5SP119-201ENST00000362715 117 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 RNA5SP387-201ENST00000364226 106 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA1P02708 SNORA3.3-201ENST00000408712 125 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.34□□□□□ -1.71
CHRNA1P02708 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA1P02708 OR4F13P-201ENST00000428478 931 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA1P02708 YME1L1P1-201ENST00000429435 297 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA1P02708 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA1P02708 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA1P02708 RPL23AP12-201ENST00000467573 473 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA1P02708 PPBPP1-201ENST00000510807 373 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.34□□□□□ -1.71
CHRNA1P02708 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA1P02708 RN7SKP157-201ENST00000516174 282 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 RNA5SP154-201ENST00000516193 111 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 RNU1-95P-201ENST00000516357 160 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 RNU6-1004P-201ENST00000516584 111 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 RNU1-128P-201ENST00000516704 160 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 SCARNA14-201ENST00000516903 136 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA1P02708 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
CHRNA1P02708 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms