Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MTND3P16-201ENST00000452205 344 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ALDH1A1P00352 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC110794.1-201ENST00000505816 425 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC091885.1-201ENST00000506658 268 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 NDUFB5P1-201ENST00000508134 564 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC138866.2-201ENST00000508650 584 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 FAM206BP-201ENST00000510179 541 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 MRPS16P1-201ENST00000523462 412 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 AL137100.2-201ENST00000555786 315 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 RPL12P48-201ENST00000605620 304 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 AC107871.2-201ENST00000612894 502 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 BX322650.1-201ENST00000332359 2143 ntBASIC7.07□□□□□ -1.28
ALDH1A1P00352 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ALDH1A1P00352 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ALDH1A1P00352 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
ALDH1A1P00352 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.07□□□□□ -1.28
ALDH1A1P00352 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC015871.3-201ENST00000618835 2261 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 MFSD8-217ENST00000641178 4374 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 MTND5P19-201ENST00000424872 1794 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 RN7SKP128-201ENST00000364270 303 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 MIR514A2-201ENST00000385131 88 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 MIR514A3-201ENST00000385132 88 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AL133270.1-201ENST00000402635 279 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 BTBD10P2-201ENST00000404779 676 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC016739.1-201ENST00000405359 345 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 MIR548K-201ENST00000408406 116 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC073264.1-201ENST00000411508 416 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AL136133.1-201ENST00000413694 376 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 RPL35AP3-201ENST00000414680 288 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC092634.6-201ENST00000418558 192 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 RPL31P12-201ENST00000422587 358 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 FTH1P10-202ENST00000430907 550 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 RPL23AP50-201ENST00000434149 455 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 SNRPEP7-201ENST00000438350 220 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC092809.1-201ENST00000441469 474 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 OR2AO1P-201ENST00000476497 403 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC079080.1-201ENST00000479841 822 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC093270.2-201ENST00000486157 792 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 VN1R104P-201ENST00000505115 1009 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 Y_RNA.665-201ENST00000516177 98 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC022616.6-201ENST00000520479 119 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 IMMP1LP3-201ENST00000604197 224 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 MIR6748-201ENST00000610433 71 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 CASC19-260ENST00000641828 2001 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ALDH1A1P00352 AL391262.1-201ENST00000556558 1992 ntBASIC7.06□□□□□ -1.28
ALDH1A1P00352 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.06□□□□□ -1.28
ALDH1A1P00352 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ALDH1A1P00352 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.05□□□□□ -1.28
ALDH1A1P00352 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ALDH1A1P00352 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ALDH1A1P00352 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms