Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC091860.1-201ENST00000505723 432 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 PAICSP4-201ENST00000517543 1253 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AC010503.3-201ENST00000594355 540 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 ZNF92P3-201ENST00000596594 954 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 LSM1P2-201ENST00000604911 322 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 AL139344.1-201ENST00000605228 195 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 TUSC7.1-201ENST00000610969 165 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 VN1R74P-201ENST00000613259 503 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AC017037.3-201ENST00000625016 472 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 MTND4P10-201ENST00000446199 1363 ntBASIC6.53□□□□□ -1.36
RAPGEF3O95398 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RAPGEF3O95398 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RAPGEF3O95398 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 GTF2H2B-203ENST00000508065 1432 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 RPL21P67-201ENST00000402896 478 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 TAF13P2-201ENST00000416876 286 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 RPF2P1-201ENST00000424137 906 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 C1DP1-201ENST00000426049 402 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 KATNBL1P3-201ENST00000443475 909 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 RNU7-140P-201ENST00000459546 60 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 PRDX3P4-201ENST00000470828 747 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 AC010486.2-201ENST00000505572 483 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 AL592156.1-201ENST00000508758 304 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 RNA5SP497-201ENST00000516081 97 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 SNORA70.24-201ENST00000517233 118 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 MTCO3P15-201ENST00000526563 574 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 SETP1-201ENST00000556014 845 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 Z94722.1-201ENST00000604328 474 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 AC019176.2-201ENST00000611579 315 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 MIR6500-201ENST00000622700 86 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 AC024595.1-201ENST00000623088 387 ntBASIC6.52□□□□□ -1.37
RAPGEF3O95398 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RAPGEF3O95398 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RAPGEF3O95398 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC104454.1-201ENST00000421341 1401 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC104297.1-201ENST00000393779 870 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 MTND2P18-201ENST00000419962 1030 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 RPL35AP21-201ENST00000437667 333 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC068135.1-201ENST00000446164 246 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 EXTL2P1-201ENST00000446218 416 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC104108.1-201ENST00000509930 412 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 DUXAP6-201ENST00000553858 601 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC124856.1-201ENST00000600819 896 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 MTND3P19-201ENST00000603825 345 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AC080013.6-201ENST00000606185 215 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 AL021997.2-201ENST00000615674 271 ntBASIC6.51□□□□□ -1.37
RAPGEF3O95398 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.51□□□□□ -1.37
RAPGEF3O95398 AL512506.2-201ENST00000624472 458 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms