Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRNP200O75643 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 CRYBB2P1-203ENST00000415709 538 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 RN7SL293P-201ENST00000481765 281 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.37□□□□□ -1.87
SNRNP200O75643 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 RN7SKP157-201ENST00000516174 282 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 AC099489.2-201ENST00000574976 260 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.37□□□□□ -1.87
SNRNP200O75643 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 AC009229.4-201ENST00000623854 1947 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AL450326.2-201ENST00000421913 1962 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 LINC00561-201ENST00000565815 2738 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
SNRNP200O75643 LINC02471-203ENST00000641941 4752 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 ZNF603P-201ENST00000405613 487 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AL158071.1-201ENST00000430315 461 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 BX119904.1-201ENST00000432026 348 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRNP200O75643 AC007967.1-201ENST00000455422 1159 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AC099563.1-201ENST00000456086 418 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 RPS27AP18-201ENST00000515536 459 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 SNORA70.17-201ENST00000516449 133 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRNP200O75643 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRNP200O75643 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNRNP200O75643 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRNP200O75643 AC096577.2-201ENST00000611455 153 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 AC004777.1-201ENST00000624317 287 ntBASIC3.37□□□□□ -1.87
SNRNP200O75643 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRNP200O75643 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRNP200O75643 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
SNRNP200O75643 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRNP200O75643 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.36□□□□□ -1.87
SNRNP200O75643 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.36□□□□□ -1.87
SNRNP200O75643 AL133412.1-201ENST00000380194 2992 ntBASIC3.36□□□□□ -1.87
SNRNP200O75643 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRNP200O75643 AC007685.1-201ENST00000329806 452 ntBASIC3.36□□□□□ -1.87
SNRNP200O75643 OSTCP5-201ENST00000425293 453 ntBASIC3.36□□□□□ -1.87
SNRNP200O75643 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.36□□□□□ -1.87
SNRNP200O75643 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.36□□□□□ -1.87
SNRNP200O75643 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.36□□□□□ -1.87
SNRNP200O75643 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.36□□□□□ -1.87
SNRNP200O75643 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.36□□□□□ -1.87
SNRNP200O75643 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
SNRNP200O75643 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.36□□□□□ -1.87
SNRNP200O75643 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRNP200O75643 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.36□□□□□ -1.87
SNRNP200O75643 AC106871.1-201ENST00000568324 3102 ntBASIC3.36□□□□□ -1.87
SNRNP200O75643 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SNRNP200O75643 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRNP200O75643 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.35□□□□□ -1.87
SNRNP200O75643 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SNRNP200O75643 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SNRNP200O75643 RPS7P15-201ENST00000415804 584 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.35□□□□□ -1.87
SNRNP200O75643 ARL4AP4-201ENST00000434170 518 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AC074250.1-201ENST00000511117 192 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.35□□□□□ -1.87
SNRNP200O75643 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.35□□□□□ -1.87
SNRNP200O75643 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.35□□□□□ -1.87
SNRNP200O75643 AC138932.5-201ENST00000617759 563 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AC244205.2-202ENST00000635781 342 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.35□□□□□ -1.87
SNRNP200O75643 PRO1804-201ENST00000623780 2050 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AL049781.1-201ENST00000623195 3585 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.35□□□□□ -1.87
SNRNP200O75643 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.35□□□□□ -1.87
SNRNP200O75643 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SNRNP200O75643 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.35□□□□□ -1.87
SNRNP200O75643 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNRNP200O75643 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 RN7SL809P-201ENST00000482040 297 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AC113430.1-201ENST00000506872 718 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.35□□□□□ -1.87
SNRNP200O75643 MIR3922-201ENST00000585192 84 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.35□□□□□ -1.87
SNRNP200O75643 AC096553.1-201ENST00000605169 829 ntBASIC3.35□□□□□ -1.87
SNRNP200O75643 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
SNRNP200O75643 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNRNP200O75643 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.34□□□□□ -1.87
SNRNP200O75643 MIR670-201ENST00000390142 98 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 RNU2-65P-201ENST00000410162 185 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
SNRNP200O75643 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
SNRNP200O75643 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms