Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC087283.1-201ENST00000604029 1074 ntBASIC5.03□□□□□ -1.6
VPS4BO75351 AC068792.1-201ENST00000621354 417 ntBASIC5.03□□□□□ -1.6
VPS4BO75351 AP000346.3-201ENST00000622821 210 ntBASIC5.03□□□□□ -1.6
VPS4BO75351 AC091953.3-201ENST00000623220 236 ntBASIC5.03□□□□□ -1.6
VPS4BO75351 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4BO75351 AL731532.2-201ENST00000623542 1953 ntBASIC5.03□□□□□ -1.6
VPS4BO75351 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS4BO75351 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4BO75351 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS4BO75351 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 PANDAR-201ENST00000629595 1506 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS4BO75351 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS4BO75351 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 NCLP2-201ENST00000416078 1462 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS4BO75351 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 MIR133B-201ENST00000362210 119 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 MIR105-1-201ENST00000385222 81 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS4BO75351 RNU6-192P-201ENST00000391253 100 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 SNORA26.8-201ENST00000391306 124 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 U3.36-201ENST00000408418 213 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 RNU2-65P-201ENST00000410162 185 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC006366.1-201ENST00000422002 759 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AL049610.1-201ENST00000423374 372 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC008072.1-201ENST00000434254 824 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 RPS25P9-201ENST00000435591 252 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC004980.3-201ENST00000447046 365 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 ELOCP30-201ENST00000447108 299 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC104634.1-201ENST00000452720 462 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 MTCO3P11-201ENST00000455103 774 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC091180.1-201ENST00000462104 372 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 RN7SL738P-201ENST00000470264 297 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 RPL7P38-201ENST00000488396 739 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AL024509.2-201ENST00000493462 493 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC010424.1-201ENST00000506336 297 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS4BO75351 OR7K1P-201ENST00000546439 926 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC068993.1-201ENST00000546724 589 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4BO75351 RSL24D1P11-201ENST00000591045 491 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC073544.2-201ENST00000601155 540 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 FAM25E-202ENST00000608562 189 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC015914.2-201ENST00000618167 288 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC243756.2-201ENST00000618406 463 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC092184.1-201ENST00000625042 715 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS4BO75351 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS4BO75351 AC127502.3-201ENST00000636170 1206 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS4BO75351 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS4BO75351 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4BO75351 BTBD10P1-201ENST00000549824 1352 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AL353743.4-201ENST00000422653 1547 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 AC092079.1-201ENST00000558620 1985 ntBASIC5.02□□□□□ -1.61
VPS4BO75351 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS4BO75351 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS4BO75351 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS4BO75351 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS4BO75351 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS4BO75351 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS4BO75351 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS4BO75351 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS4BO75351 AL672167.1-206ENST00000356293 943 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 RNU4-21P-201ENST00000362802 126 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 SNORA4.1-201ENST00000364263 144 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS4BO75351 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS4BO75351 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 DUTP5-201ENST00000406790 469 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 AL133264.1-201ENST00000407157 562 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS4BO75351 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS4BO75351 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS4BO75351 RBMY2QP-201ENST00000429799 1147 ntBASIC5.01□□□□□ -1.61
VPS4BO75351 MTCYBP39-201ENST00000437562 491 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms