Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH4O15457 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH4O15457 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.24□□□□□ -1.73
MSH4O15457 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.24□□□□□ -1.73
MSH4O15457 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.24□□□□□ -1.73
MSH4O15457 AL049634.3-201ENST00000604968 457 ntBASIC4.24□□□□□ -1.73
MSH4O15457 AL158196.1-201ENST00000616786 434 ntBASIC4.24□□□□□ -1.73
MSH4O15457 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MSH4O15457 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
MSH4O15457 AC093535.2-201ENST00000624769 2326 ntBASIC4.24□□□□□ -1.73
MSH4O15457 AC009313.2-201ENST00000417893 1941 ntBASIC4.24□□□□□ -1.73
MSH4O15457 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MSH4O15457 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH4O15457 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
MSH4O15457 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
MSH4O15457 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MSH4O15457 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MSH4O15457 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MSH4O15457 AL450326.2-201ENST00000421913 1962 ntBASIC4.23□□□□□ -1.73
MSH4O15457 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 AL122126.1-201ENST00000546905 1318 ntBASIC4.23□□□□□ -1.73
MSH4O15457 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 ASNSP1-204ENST00000641977 1664 ntBASIC4.23□□□□□ -1.73
MSH4O15457 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MSH4O15457 OR5T3-201ENST00000303059 1023 ntBASIC4.23□□□□□ -1.73
MSH4O15457 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
MSH4O15457 RNU6-244P-201ENST00000391028 104 ntBASIC4.23□□□□□ -1.73
MSH4O15457 AC007066.1-201ENST00000392902 381 ntBASIC4.23□□□□□ -1.73
MSH4O15457 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.23□□□□□ -1.73
MSH4O15457 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 OR5AW1P-201ENST00000426334 1006 ntBASIC4.23□□□□□ -1.73
MSH4O15457 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 SETD6P1-201ENST00000444575 317 ntBASIC4.23□□□□□ -1.73
MSH4O15457 CLIC4P1-201ENST00000453177 535 ntBASIC4.23□□□□□ -1.73
MSH4O15457 SNORA84-201ENST00000459229 133 ntBASIC4.23□□□□□ -1.73
MSH4O15457 AC007537.2-201ENST00000472093 511 ntBASIC4.23□□□□□ -1.73
MSH4O15457 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 AF186190.1-201ENST00000517470 480 ntBASIC4.23□□□□□ -1.73
MSH4O15457 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MSH4O15457 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 AC068714.1-201ENST00000559623 800 ntBASIC4.23□□□□□ -1.73
MSH4O15457 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.23□□□□□ -1.73
MSH4O15457 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.23□□□□□ -1.73
MSH4O15457 KATNBL1P1-201ENST00000605192 748 ntBASIC4.23□□□□□ -1.73
MSH4O15457 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 CR392039.5-201ENST00000623201 510 ntBASIC4.23□□□□□ -1.73
MSH4O15457 AC012442.3-202ENST00000636742 206 ntBASIC4.23□□□□□ -1.73
MSH4O15457 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.23□□□□□ -1.73
MSH4O15457 KPNA2P2-201ENST00000419546 1489 ntBASIC4.23□□□□□ -1.73
MSH4O15457 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MSH4O15457 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MSH4O15457 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.22□□□□□ -1.73
MSH4O15457 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MSH4O15457 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MSH4O15457 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MSH4O15457 AC017002.4-201ENST00000604721 1525 ntBASIC4.22□□□□□ -1.73
MSH4O15457 RNU6-666P-201ENST00000363499 107 ntBASIC4.22□□□□□ -1.73
MSH4O15457 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MSH4O15457 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
MSH4O15457 AC093719.1-202ENST00000392735 373 ntBASIC4.22□□□□□ -1.73
MSH4O15457 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.22□□□□□ -1.73
MSH4O15457 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC018644.1-201ENST00000429934 551 ntBASIC4.22□□□□□ -1.73
MSH4O15457 BX119904.1-201ENST00000432026 348 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.22□□□□□ -1.73
MSH4O15457 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.22□□□□□ -1.73
MSH4O15457 AC023512.1-201ENST00000444513 499 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.22□□□□□ -1.73
MSH4O15457 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.22□□□□□ -1.73
MSH4O15457 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
MSH4O15457 METTL15P1-201ENST00000481421 1045 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC090543.2-201ENST00000483963 348 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC069499.1-201ENST00000489433 509 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC109458.1-201ENST00000508858 316 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.22□□□□□ -1.73
MSH4O15457 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.22□□□□□ -1.73
MSH4O15457 SNORA67.7-201ENST00000516664 135 ntBASIC4.22□□□□□ -1.73
MSH4O15457 HMGB1P23-201ENST00000518743 568 ntBASIC4.22□□□□□ -1.73
MSH4O15457 TRMT10BP1-201ENST00000519377 943 ntBASIC4.22□□□□□ -1.73
MSH4O15457 SUMO2P20-201ENST00000520803 283 ntBASIC4.22□□□□□ -1.73
MSH4O15457 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.22□□□□□ -1.73
MSH4O15457 AC023158.1-201ENST00000561632 1025 ntBASIC4.22□□□□□ -1.73
MSH4O15457 OR1AB1P-201ENST00000585564 761 ntBASIC4.22□□□□□ -1.73
MSH4O15457 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.22□□□□□ -1.73
MSH4O15457 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.22□□□□□ -1.73
MSH4O15457 AL391834.1-201ENST00000609609 560 ntBASIC4.22□□□□□ -1.73
MSH4O15457 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
MSH4O15457 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
MSH4O15457 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
MSH4O15457 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
MSH4O15457 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.22□□□□□ -1.73
MSH4O15457 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
MSH4O15457 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
MSH4O15457 DDX6P1-205ENST00000441966 1436 ntBASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms