Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.55□□□□□ -1.84
UPK1AO00322 AC092013.1-201ENST00000438795 332 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 MRPS31P2-201ENST00000451581 518 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 NANOGP10-201ENST00000453325 895 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
UPK1AO00322 AC108471.1-201ENST00000513977 287 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 SCARNA14-201ENST00000516903 136 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 IGHV3-32-201ENST00000519182 355 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 AC022695.1-201ENST00000522089 237 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.55□□□□□ -1.84
UPK1AO00322 VN1R79P-201ENST00000593540 513 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK1AO00322 RNVU1-4-201ENST00000612985 164 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 FP236240.3-201ENST00000623061 327 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 AC008725.1-201ENST00000605123 2263 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 Z73965.1-201ENST00000623412 2297 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.55□□□□□ -1.84
UPK1AO00322 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 AL451142.2-201ENST00000429076 2090 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
UPK1AO00322 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK1AO00322 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPK1AO00322 AC010329.2-201ENST00000595195 2737 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPK1AO00322 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPK1AO00322 RNU6-304P-201ENST00000364855 107 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 SNORA3.3-201ENST00000408712 125 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 RN7SKP222-201ENST00000410651 315 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.54□□□□□ -1.84
UPK1AO00322 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK1AO00322 MTCO1P45-201ENST00000431457 267 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC091390.1-201ENST00000433904 331 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK1AO00322 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC005229.2-201ENST00000456995 399 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 VN1R105P-201ENST00000486595 910 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPK1AO00322 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK1AO00322 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC026784.1-201ENST00000507986 352 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC117525.1-201ENST00000515228 503 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.54□□□□□ -1.84
UPK1AO00322 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 OR5AP1P-201ENST00000529730 940 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPK1AO00322 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 AC018552.3-201ENST00000567416 561 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AGGF1P6-201ENST00000569213 976 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 ADAM3B-201ENST00000569937 840 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC053481.4-201ENST00000583164 216 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
UPK1AO00322 MTCO2P22-201ENST00000603246 681 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC005229.3-201ENST00000603438 323 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AL365503.1-201ENST00000605247 905 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 SNORA62.6-201ENST00000606322 83 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AL354760.1-201ENST00000608357 643 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC092653.1-201ENST00000608509 531 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 AC008121.2-201ENST00000614647 523 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.54□□□□□ -1.84
UPK1AO00322 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.54□□□□□ -1.84
UPK1AO00322 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPK1AO00322 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
UPK1AO00322 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.53□□□□□ -1.84
UPK1AO00322 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
UPK1AO00322 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UPK1AO00322 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
UPK1AO00322 RNU6-891P-201ENST00000384280 111 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
UPK1AO00322 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
UPK1AO00322 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.53□□□□□ -1.84
UPK1AO00322 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC048351.1-201ENST00000420064 602 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 NDUFB1P1-201ENST00000435191 180 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC103987.1-201ENST00000473394 348 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AP000926.1-201ENST00000479573 241 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms