Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL592437.1-201ENST00000443781 492 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 RPL36AP15-201ENST00000444514 266 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC188H7C350 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 RPL12P20-201ENST00000475538 479 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 AC008885.2-201ENST00000509506 930 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 RN7SKP82-201ENST00000516786 223 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC124293.1-201ENST00000530034 493 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC188H7C350 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 NIFKP8-201ENST00000560500 874 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 AC104662.1-201ENST00000604448 511 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 HMGB1P50-201ENST00000605814 607 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC018645.2-201ENST00000609151 472 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC000123.2-201ENST00000623124 461 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC188H7C350 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC188H7C350 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC188H7C350 XPOTP1-201ENST00000443317 2398 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC074029.4-201ENST00000624796 1859 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 OR10J6P-201ENST00000289731 930 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 RNU5B-1-201ENST00000363286 116 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 MIR585-201ENST00000384887 94 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 UBE2V1P9-201ENST00000414760 368 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC234064.1-201ENST00000436312 247 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 PSMD10P3-201ENST00000437000 448 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 H2AFZP6-201ENST00000444403 394 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC010326.1-201ENST00000462726 602 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 RPL31P61-201ENST00000496160 376 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 NDUFB5P1-201ENST00000508134 564 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 OR5H4P-201ENST00000510851 923 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 AP003102.1-201ENST00000525638 661 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC188H7C350 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 MIR4646-201ENST00000580775 63 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC008507.2-201ENST00000588402 1176 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC008782.1-201ENST00000603386 430 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC115286.1-201ENST00000604298 434 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC099785.1-201ENST00000605697 437 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC188H7C350 Mico1.1-201ENST00000611698 204 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 RNU6-1192P-201ENST00000612197 107 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 RNU6-489P-201ENST00000618289 107 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC067931.1-201ENST00000624190 671 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC188H7C350 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.37□□□□□ -1.71
CCDC188H7C350 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC188H7C350 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC188H7C350 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC188H7C350 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC188H7C350 MARK2P15-201ENST00000432204 2186 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
CCDC188H7C350 AL512646.1-201ENST00000269395 1077 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC188H7C350 MIR331-201ENST00000362302 94 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AL603865.2-201ENST00000401679 213 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 IPMKP1-201ENST00000425988 855 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms