Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 SNORA62.2-201ENST00000364672 152 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 RNU6-146P-201ENST00000384602 108 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 TCEA1P4-201ENST00000415066 844 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC068533.1-201ENST00000418542 415 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 OSTCP5-201ENST00000425293 453 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 FTH1P6-201ENST00000430768 320 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 NPM1P48-201ENST00000436002 853 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 OR52Y1P-201ENST00000452418 828 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 NUTF2P7-201ENST00000453086 375 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 EIF2S2P4-201ENST00000461070 984 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 RPL23AP12-201ENST00000467573 473 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 RN7SL385P-201ENST00000468873 276 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AP000926.1-201ENST00000479573 241 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC106872.2-201ENST00000494303 480 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC092045.1-201ENST00000495716 1231 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 FTH1P24-201ENST00000503502 462 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 NDUFB9P3-201ENST00000521269 501 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 DUXAP6-201ENST00000553858 601 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 MIR4425-201ENST00000580572 84 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC067959.1-201ENST00000604334 379 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 OTUD4P1-201ENST00000237841 3067 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 AC095050.2-201ENST00000510748 1458 ntBASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAV27A0A087WT01 ASNSP1-204ENST00000641977 1664 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 MFSD8-220ENST00000641243 1422 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 SNORD3H-201ENST00000384486 214 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 U8.11-201ENST00000384699 133 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 U8.12-201ENST00000384701 133 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 CLIC4P1-201ENST00000453177 535 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 U8.18-201ENST00000459285 133 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC004801.2-202ENST00000463559 283 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 RPL21P71-201ENST00000465598 459 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC020593.1-201ENST00000507399 299 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 ARL2BPP6-201ENST00000512757 439 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 SNORA70.18-201ENST00000516696 98 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AP000926.4-201ENST00000527351 454 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 HIGD1AP5-201ENST00000529959 259 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC084757.1-201ENST00000559987 490 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC107982.3-201ENST00000584957 985 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC123786.2-201ENST00000603459 275 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC010680.3-201ENST00000604215 520 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AL034351.1-201ENST00000605288 668 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AL592295.2-201ENST00000612578 206 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AL357559.1-201ENST00000622228 274 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 AC007823.1-201ENST00000569932 1566 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
TRAV27A0A087WT01 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC007066.1-201ENST00000392902 381 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 HMGB3P18-201ENST00000406327 590 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 Y_RNA.625-201ENST00000411256 107 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 RN7SKP53-201ENST00000411337 315 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 DBIP2-201ENST00000419076 262 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 RPL7P53-201ENST00000421245 739 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 MTND2P2-201ENST00000434633 945 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 EXTL2P1-201ENST00000446218 416 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms