Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC023128.2-201ENST00000420880 1223 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AL391219.1-201ENST00000422570 483 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC005189.1-201ENST00000431286 310 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AL035458.1-201ENST00000433096 585 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC122718.1-201ENST00000439448 744 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 RPL5P32-201ENST00000454085 879 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 FAM133DP-201ENST00000464802 691 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC104982.1-201ENST00000478775 574 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 HMGB1P38-201ENST00000490557 577 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC146944.2-203ENST00000502493 354 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC069306.1-201ENST00000507006 843 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC139495.1-202ENST00000513164 354 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AL049870.4-201ENST00000555741 486 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC027455.1-201ENST00000574104 594 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 MIR1254-2-201ENST00000579553 63 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 RN7SL600P-201ENST00000581811 299 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC012254.4-201ENST00000588843 273 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC034229.4-201ENST00000607861 441 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC126544.2-201ENST00000625174 749 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AC134882.1-201ENST00000603738 1676 ntBASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1G3Q9Y6M4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RNU1-85P-201ENST00000364127 164 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RNU6-207P-201ENST00000384137 107 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RNU6-532P-201ENST00000384318 107 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AL355615.1-201ENST00000406187 641 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AL034374.1-201ENST00000406329 351 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RN7SKP33-201ENST00000410942 340 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 SFR1P2-201ENST00000421841 730 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC022022.1-201ENST00000430304 178 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RPL23AP65-201ENST00000475608 468 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC108022.1-201ENST00000493466 478 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RN7SKP141-201ENST00000516167 338 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AL121834.1-201ENST00000572284 509 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 RPAP2P1-201ENST00000603626 1168 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AL050303.3-201ENST00000613704 284 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC007546.2-201ENST00000623996 360 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC099654.9-201ENST00000637055 678 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 FP325313.1-201ENST00000638228 703 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 AC119674.1-212ENST00000641155 993 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ASNSP1-201ENST00000518311 1939 ntBASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.2□□□□□ -1.74
CSNK1G3Q9Y6M4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms