Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC079610.2-201ENST00000604818 690 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC010201.1-201ENST00000605051 540 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 Z98200.1-201ENST00000607298 470 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 MLECP1-201ENST00000615893 709 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC007546.2-201ENST00000623996 360 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 BMS1P21-201ENST00000634565 365 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AL355578.1-201ENST00000607405 1328 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 RNA5SP307-201ENST00000362863 116 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 MIR708-201ENST00000390708 88 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 RPS27AP11-201ENST00000402798 447 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 SNORA11F-201ENST00000408237 128 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 UBE2V1P11-201ENST00000411559 285 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC092638.1-201ENST00000411966 1275 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AL449283.1-202ENST00000418249 604 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 GAPDHP49-201ENST00000421421 961 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC092648.1-201ENST00000425870 423 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC092634.2-201ENST00000428146 1010 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 RPL23AP52-201ENST00000439311 478 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 ARL4AP3-201ENST00000441452 574 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 FGF7P3-201ENST00000454645 303 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC133473.1-201ENST00000455173 299 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 RPS23P7-201ENST00000466210 444 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 MTND6P6-201ENST00000478031 263 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 STMN1P2-201ENST00000508435 439 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 OR5BC1P-201ENST00000529327 739 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 CYCSP28-201ENST00000534284 321 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC022884.3-201ENST00000579571 248 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 VN1R87P-201ENST00000596706 487 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 RPL7P50-201ENST00000600588 727 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC018618.2-201ENST00000604770 446 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC083809.1-201ENST00000615051 472 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC114781.5-201ENST00000615297 108 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC009464.1-201ENST00000615731 469 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 uc_338.9-201ENST00000617424 182 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AL355493.4-201ENST00000618530 292 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC068057.2-201ENST00000624047 895 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AP000843.1-201ENST00000624880 701 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AC017104.5-201ENST00000637647 639 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 AL118496.1-201ENST00000440201 1812 ntBASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SNX9Q9Y5X1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 EOGT-210ENST00000615922 1931 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RNU1-44P-201ENST00000384453 163 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC097374.1-203ENST00000400783 485 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 VDAC1P9-201ENST00000412766 841 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 NIPA2P1-201ENST00000426223 976 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RPEP2-201ENST00000432149 701 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms