Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC128657.1-201ENST00000549459 145 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC083837.1-201ENST00000565297 2994 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AP003115.1-201ENST00000569849 463 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR4312-201ENST00000579909 76 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 UBE2L4-201ENST00000587688 464 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC091133.5-201ENST00000603088 301 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL592436.1-201ENST00000605135 558 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 CTHRC1P1-201ENST00000605383 469 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 uc_338.11-201ENST00000619132 160 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC027506.1-201ENST00000621395 198 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 MTCO1P7-201ENST00000419523 1542 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 HSPD1P8-201ENST00000400121 1658 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL359922.3-201ENST00000624779 1670 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 Y_RNA.339-201ENST00000365325 102 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-39P-201ENST00000384344 107 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-278P-201ENST00000390945 109 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 MRPL32P1-201ENST00000406301 247 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 RPL18AP14-201ENST00000417685 526 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AHCYP8-201ENST00000425108 209 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ARL2BPP10-201ENST00000446487 531 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 RPS29P15-201ENST00000458329 171 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 FTH1P21-201ENST00000512179 511 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC093303.1-201ENST00000514549 295 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC022634.1-201ENST00000520765 532 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC024224.1-201ENST00000538284 609 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 RN7SL657P-201ENST00000582431 293 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 7SK.7-201ENST00000603504 247 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AL121992.2-201ENST00000606262 256 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC245517.5-201ENST00000611529 162 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR7854-201ENST00000620068 65 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AL359757.2-201ENST00000624309 274 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC009779.8-201ENST00000641684 4384 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 AC074141.1-201ENST00000588129 2995 ntBASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA11Q9Y5H2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms