Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 DSTNP2-201ENST00000504533 515 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC109927.2-201ENST00000506416 303 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 MRPS33P2-201ENST00000507850 322 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RNA5SP230-201ENST00000517039 122 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC012339.2-201ENST00000523996 453 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC018552.3-201ENST00000567416 561 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AL139418.1-201ENST00000613613 177 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC116165.2-201ENST00000616705 206 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC022509.4-201ENST00000621404 572 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AL590240.3-201ENST00000621416 943 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC063976.2-201ENST00000425667 3556 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 MTND5P24-201ENST00000438892 1767 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 SNORA56-201ENST00000383966 129 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 RNU4-31P-201ENST00000384211 141 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL031577.2-201ENST00000404133 280 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 RPS16P5-201ENST00000406501 404 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 RNU6-603P-201ENST00000411403 107 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL590806.1-201ENST00000415818 853 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC027644.1-201ENST00000419595 298 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL139421.1-201ENST00000423010 169 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC007559.1-201ENST00000428736 355 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL606662.1-201ENST00000445763 553 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 BMI1P1-201ENST00000445879 941 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AP000936.2-201ENST00000447151 681 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 SRRM1P2-201ENST00000464531 1192 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 Y_RNA.695-201ENST00000516715 107 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 UBE2NP1-201ENST00000545592 458 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC116553.2-201ENST00000564203 463 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC079171.1-201ENST00000568788 914 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC073544.2-201ENST00000601155 540 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC068790.7-201ENST00000602347 528 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AP003465.2-201ENST00000602571 373 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AL512782.1-201ENST00000603093 364 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC020910.3-201ENST00000603701 874 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC010200.2-201ENST00000605098 235 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC092354.2-201ENST00000607786 514 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC239868.4-201ENST00000608318 671 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC005332.10-201ENST00000612725 619 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC121761.2-201ENST00000617300 689 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AC018755.4-201ENST00000619715 454 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.74□□□□□ -1.49
CTDP1Q9Y5B0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms