Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC024023.1-201ENST00000624530 922 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 HSPA8P17-201ENST00000427029 1382 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC067945.1-201ENST00000342609 618 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 MIR383-201ENST00000362257 73 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 RNU6-532P-201ENST00000384318 107 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 RNU6-178P-201ENST00000384631 104 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AL049693.1-201ENST00000402760 611 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 RPS27AP11-201ENST00000402798 447 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 OR2X1P-201ENST00000421144 687 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 EIF1P3-201ENST00000423841 334 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC091390.1-201ENST00000433904 331 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 PTGES3P1-201ENST00000439531 483 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC022431.1-201ENST00000450941 438 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 PTGES3P5-201ENST00000455109 434 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC079804.1-201ENST00000461922 436 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 NAP1L1P3-201ENST00000462291 880 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 RN7SL385P-201ENST00000468873 276 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 RN7SL41P-201ENST00000476144 297 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 PARP4P3-201ENST00000510265 317 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC119751.5-201ENST00000514077 770 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 OR5AK3P-201ENST00000527486 1297 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 LRRC6P1-201ENST00000532188 885 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC025884.1-201ENST00000556034 378 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 TVP23BP1-201ENST00000557500 617 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 CCDC58P3-201ENST00000590792 430 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 NIFKP6-201ENST00000598115 845 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC096586.1-201ENST00000610267 561 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 AC006338.2-201ENST00000616864 791 ntBASIC4.57□□□□□ -1.68
SIX4Q9UIU6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
SIX4Q9UIU6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC009951.1-201ENST00000623674 2614 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 SNORA70.2-201ENST00000364506 135 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 RNU6-1242P-201ENST00000391052 103 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 MTND4P13-201ENST00000402078 1023 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC009302.1-201ENST00000417147 390 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 MTND4P3-201ENST00000417829 541 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 DPY19L1P2-201ENST00000426647 915 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 MTCO1P52-201ENST00000433928 531 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 MTCYBP31-201ENST00000438855 1122 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC244505.3-201ENST00000454598 187 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC005008.1-201ENST00000456151 612 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms