Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RN7SKP111-201ENST00000410349 271 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 HMGN2P27-201ENST00000427352 270 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 RPL23AP69-201ENST00000431134 458 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 TXNP1-201ENST00000441872 371 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 AC140076.1-201ENST00000449897 361 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 S100A11P1-201ENST00000477525 312 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 AL359535.1-201ENST00000612100 1087 ntBASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.66□□□□□ -1.5
RIMBP3Q9UFD9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
RIMBP3Q9UFD9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 AL353678.1-201ENST00000422735 741 ntBASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 TPTE2P3-201ENST00000441562 1189 ntBASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 TRBV12-1-201ENST00000479785 344 ntBASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 AC110794.1-201ENST00000505816 425 ntBASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.65□□□□□ -1.51
RIMBP3Q9UFD9 XGY1-201ENST00000381172 446 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 RN7SKP97-201ENST00000410966 333 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 SKP1P3-201ENST00000429280 487 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 AC108734.1-201ENST00000439549 399 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 RPL23AP65-201ENST00000475608 468 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 LSM3P2-201ENST00000551246 273 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 MIR4472-2-201ENST00000582069 67 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 AC018692.3-201ENST00000623929 123 ntBASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RIMBP3Q9UFD9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 RPL7P36-201ENST00000444633 681 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 RPS20P32-201ENST00000456044 356 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AC009159.1-201ENST00000618386 642 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 Z83843.1-201ENST00000604070 3685 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AL031679.1-201ENST00000400616 525 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AL139281.1-201ENST00000422120 335 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AL031584.1-201ENST00000447169 754 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 RPS17P11-201ENST00000474297 293 ntBASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.63□□□□□ -1.51
RIMBP3Q9UFD9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AC083837.1-201ENST00000565297 2994 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 OR5J1P-201ENST00000313544 939 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 RNU4-47P-201ENST00000410876 114 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AC017079.2-201ENST00000416102 485 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 TOMM20P4-201ENST00000427861 435 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AC073508.1-201ENST00000428866 656 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 HMGB1P5-202ENST00000451497 985 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AC006517.1-201ENST00000480485 328 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 MIR4425-201ENST00000580572 84 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AC006557.5-201ENST00000603126 811 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AL096803.3-201ENST00000609032 532 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AL591424.2-201ENST00000617023 128 ntBASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
RIMBP3Q9UFD9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms