Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC053481.4-201ENST00000583164 216 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 KLKP1-201ENST00000595979 403 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 MIR6875-201ENST00000617506 72 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 ZYXP1-201ENST00000617638 118 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC145207.9-201ENST00000623802 325 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 OR6C71P-202ENST00000641886 1107 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC090229.1-201ENST00000590983 1609 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC024560.2-201ENST00000507981 1497 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC233968.1-201ENST00000611212 1300 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AL138878.1-201ENST00000405131 347 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 PPIAP31-201ENST00000405422 495 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 RNU6-628P-201ENST00000410675 107 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 HMGB3P20-201ENST00000417997 600 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 RPL7P53-201ENST00000421245 739 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 MOB1AP1-201ENST00000430903 535 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC022034.3-201ENST00000471393 478 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 LARP7P4-201ENST00000481075 878 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC092851.1-201ENST00000535964 478 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC141257.3-201ENST00000572906 215 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC136624.4-201ENST00000573044 370 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 MIR4286-201ENST00000580651 93 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 MIR4512-201ENST00000583257 77 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 SNORA35B-201ENST00000607417 129 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AL354798.1-201ENST00000622505 329 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 AP001486.2-201ENST00000561652 5113 ntBASIC3.56□□□□□ -1.84
VPS29Q9UBQ0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 MTCO1P14-201ENST00000441695 1559 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 MFSD8-220ENST00000641243 1422 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 MAPK10-372ENST00000641954 3413 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 RPL31P52-201ENST00000407532 367 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 RPL23AP73-201ENST00000492507 471 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 OR7E13P-201ENST00000526052 910 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 OR8R1P-201ENST00000543943 764 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC007224.1-201ENST00000564410 144 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 ABI1P1-201ENST00000603375 1120 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms