Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 MIR449B-201ENST00000384995 97 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 IPMKP1-201ENST00000425988 855 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AL050321.1-201ENST00000432363 400 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 OR52Y1P-201ENST00000452418 828 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 PRSS3P4-201ENST00000453323 162 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 MTCO3P16-201ENST00000454456 754 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC112184.1-201ENST00000505179 312 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 IGLVIV-53-201ENST00000520107 367 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC099489.2-201ENST00000574976 260 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC026368.1-201ENST00000614934 690 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AL139089.1-201ENST00000620372 975 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 OR5AC4P-202ENST00000642086 985 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC105918.1-201ENST00000474399 838 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 CYCSP30-201ENST00000546447 172 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 AC007823.1-201ENST00000569932 1566 ntBASIC3.49□□□□□ -1.85
CCDC88CQ9P219 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC88CQ9P219 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC007068.1-201ENST00000396690 844 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 OR5AW1P-201ENST00000426334 1006 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AL035458.1-201ENST00000433096 585 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 SNORA71B-202ENST00000439232 272 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 MTND6P18-201ENST00000439477 513 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC005344.1-201ENST00000613391 459 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 OR11H5P-202ENST00000641612 1325 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC127526.1-201ENST00000417526 366 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 SYF2P2-201ENST00000417620 583 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC005300.1-201ENST00000428401 373 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 SETP6-201ENST00000479329 568 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 OR5B10P-201ENST00000532869 642 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC88CQ9P219 SRGNP1-201ENST00000603392 451 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 AC115621.1-201ENST00000604653 858 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 MIR7975-201ENST00000619350 68 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 NCAPGP1-201ENST00000505112 1814 ntBASIC3.48□□□□□ -1.85
CCDC88CQ9P219 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 RNU6-984P-201ENST00000363236 109 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 HMGB3P20-201ENST00000417997 600 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AP000907.1-201ENST00000428428 510 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 RPL21P23-201ENST00000446654 460 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 Z75741.1-201ENST00000446793 314 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 PLGLA-201ENST00000465668 449 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 RN7SL293P-201ENST00000481765 281 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 TRBV12-2-201ENST00000489763 344 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 RAC1P2-201ENST00000511164 579 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 RN7SKP157-201ENST00000516174 282 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms