Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 FTH1P24-201ENST00000503502 462 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AC011270.1-201ENST00000558606 583 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 MIR4433B-201ENST00000581329 102 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 MIR4672-201ENST00000583126 81 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AL033523.1-201ENST00000605153 153 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AC127502.3-201ENST00000636170 1206 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 LIPT1P1-201ENST00000415870 1186 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 RN7SL429P-201ENST00000479090 223 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 RN7SL489P-201ENST00000486185 223 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 RN7SL327P-201ENST00000488659 223 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 CKS1BP3-201ENST00000600888 237 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 RN7SL853P-201ENST00000617250 223 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 AP003355.3-201ENST00000623465 114 ntBASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PHRF1Q9P1Y6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC099563.1-201ENST00000456086 418 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC080014.1-201ENST00000496877 1201 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 NCAPGP2-201ENST00000557911 754 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC027281.1-201ENST00000574178 758 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 KLKP1-201ENST00000595979 403 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC116312.1-201ENST00000606841 314 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AL732618.1-201ENST00000623251 301 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 SMG1P4-204ENST00000523028 4131 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 FRG1CP-201ENST00000358464 769 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 UBA52P6-201ENST00000399822 382 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AL121834.1-202ENST00000404494 277 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 MTHFD2P2-201ENST00000407725 247 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 RPL21P109-201ENST00000422213 475 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 HSPE1P27-201ENST00000430808 296 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AL831737.1-201ENST00000441288 271 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 NANOGNBP1-201ENST00000448444 480 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC011611.1-201ENST00000552179 197 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHRF1Q9P1Y6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AC093719.1-202ENST00000392735 373 ntBASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 TRBV12-2-201ENST00000489763 344 ntBASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AC020893.1-201ENST00000502452 580 ntBASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 MYL12AP1-201ENST00000518490 515 ntBASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AC092747.2-201ENST00000545069 983 ntBASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AL163642.2-201ENST00000604722 1019 ntBASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PHRF1Q9P1Y6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 SNORA38.1-201ENST00000364172 131 ntBASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 UBE2V1P1-201ENST00000430836 445 ntBASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms