Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL009028.1-201ENST00000604895 802 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 NANOGP3-201ENST00000605855 286 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC090607.5-201ENST00000615692 224 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC104010.1-201ENST00000616889 150 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 FRG1KP-201ENST00000623592 341 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 MIR3662-201ENST00000637030 95 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 BRAFP1-201ENST00000445336 2703 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC117529.2-201ENST00000512159 2068 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 IGKV7-3-201ENST00000357453 298 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RN7SKP292-201ENST00000365522 317 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-483P-201ENST00000384088 108 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RNA5SP284-201ENST00000384547 118 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 Y_RNA.529-201ENST00000384586 119 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AL031985.1-201ENST00000392713 418 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AL139128.1-201ENST00000413921 941 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 DPPA2P2-201ENST00000418220 897 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC083875.1-201ENST00000419509 405 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 USP9YP36-201ENST00000424581 829 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 NPM1P34-201ENST00000428821 893 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 FCF1P1-201ENST00000432690 571 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC104850.1-201ENST00000435940 476 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RPL23AP19-201ENST00000436229 369 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AL935212.3-201ENST00000450729 284 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC239798.3-201ENST00000454459 408 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RPS23P6-201ENST00000466136 431 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC012123.2-201ENST00000485809 248 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RPL32P33-201ENST00000487023 394 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RPS27P23-201ENST00000487608 251 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC117522.3-201ENST00000507974 584 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 Y_RNA.701-201ENST00000516812 110 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 SNORA48.10-201ENST00000516965 160 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 ARL2BPP5-201ENST00000523141 481 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 OR5AP1P-201ENST00000529730 940 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 CYCSP2-201ENST00000558168 301 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC096996.1-201ENST00000563813 325 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 PART1_1.1-201ENST00000611761 217 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC135507.2-201ENST00000612443 309 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC138965.3-201ENST00000623875 498 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC079776.5-201ENST00000641920 211 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A2Q9H9S3 MTND5P23-201ENST00000430812 1655 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC112198.2-201ENST00000426589 6996 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms