Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC139713.2-210ENST00000641741 992 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 DCAF13P3-201ENST00000561147 1334 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 MTND4P26-201ENST00000415971 1359 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 CASC19-261ENST00000641853 1638 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 ASNSP1-204ENST00000641977 1664 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 OR10J6P-201ENST00000289731 930 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RNU1-108P-201ENST00000362556 161 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RNU1-63P-201ENST00000383902 164 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RNU6-1257P-201ENST00000384625 110 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RPS12P23-201ENST00000419579 400 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC062016.2-201ENST00000420950 676 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL592293.2-201ENST00000422292 996 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 NPM1P34-201ENST00000428821 893 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC069285.2-201ENST00000440210 275 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL592437.1-201ENST00000443781 492 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RPL23AP43-201ENST00000446445 471 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL050341.1-201ENST00000447743 313 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 FCF1P6-201ENST00000456841 595 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RNU7-140P-201ENST00000459546 60 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC010469.1-201ENST00000463864 576 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 RPS26P28-201ENST00000470806 348 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC005351.1-201ENST00000511152 786 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC015795.1-201ENST00000513669 327 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 IGLV3-26-201ENST00000520756 302 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 IGJP1-201ENST00000522682 475 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 MIR4277-201ENST00000578298 84 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 OR1AB1P-201ENST00000585564 761 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC090181.2-201ENST00000602975 672 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC004808.1-201ENST00000627671 721 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AC013437.2-201ENST00000639587 677 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 AL136964.1-201ENST00000622038 2990 ntBASIC4.1□□□□□ -1.75
UBQLN3Q9H347 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.1□□□□□ -1.75
UBQLN3Q9H347 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AC138393.1-206ENST00000540997 1886 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 MIR448-201ENST00000362131 111 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 RNU6-353P-201ENST00000364266 108 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 U3.15-201ENST00000365398 212 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 MCTS2P-201ENST00000394552 546 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AL078604.1-201ENST00000404609 466 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AC008065.1-201ENST00000428525 348 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 ELOCP6-201ENST00000429066 328 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 SKP1P3-201ENST00000429280 487 ntBASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.09□□□□□ -1.75
UBQLN3Q9H347 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms