Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL035551.1-201ENST00000446931 348 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 TRMT10BP1-201ENST00000519377 943 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC120057.2-201ENST00000571520 271 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC107982.3-201ENST00000584957 985 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC015726.1-201ENST00000602353 681 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC012468.1-201ENST00000604888 430 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AL592436.1-201ENST00000605135 558 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AC012314.7-201ENST00000619693 93 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 MIR365B-201ENST00000362317 111 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 HSPE1P8-201ENST00000406997 288 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 RPL21P11-201ENST00000461458 483 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 RN7SL93P-201ENST00000463035 293 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 NARSP2-201ENST00000518524 679 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC022695.1-201ENST00000522089 237 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 VN1R92P-201ENST00000598511 928 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AL137849.1-201ENST00000604767 169 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC018816.2-201ENST00000621460 353 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 AC027287.1-201ENST00000553115 1453 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 MAPK10-373ENST00000641983 6772 ntBASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.54□□□□□ -1.68
UPF3BQ9BZI7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 LINC00561-201ENST00000565815 2738 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC093311.1-201ENST00000506586 2021 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 MIR34B-201ENST00000385076 84 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 RN7SKP177-201ENST00000410567 355 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 MTCO1P51-201ENST00000427672 1060 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 RPS3AP6-201ENST00000484430 795 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC111000.5-201ENST00000506559 1178 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC004825.2-201ENST00000616634 455 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC020978.9-201ENST00000624380 1141 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 OR5AC4P-202ENST00000642086 985 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC073346.2-201ENST00000624724 2058 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 BX005019.1-201ENST00000561881 1810 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 AL133412.1-201ENST00000380194 2992 ntBASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPF3BQ9BZI7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 SOD2P1-201ENST00000396543 562 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 RPL21P109-201ENST00000422213 475 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AL353597.2-202ENST00000434901 373 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 SUMO2P20-201ENST00000520803 283 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AL133457.1-201ENST00000564251 987 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC099489.2-201ENST00000574976 260 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 MTND2P13-201ENST00000577438 1039 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 ZNF415P1-201ENST00000582279 1166 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AL159169.3-201ENST00000608871 561 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC096577.2-201ENST00000611455 153 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms