Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC020914.4-201ENST00000597690 277 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 BNIP3P19-201ENST00000605397 577 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC005972.3-201ENST00000606304 481 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC107905.1-201ENST00000616204 426 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC012314.7-201ENST00000619693 93 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC015967.1-201ENST00000619893 476 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC091953.5-201ENST00000622919 233 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC083899.2-201ENST00000423285 1376 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC024560.2-201ENST00000507981 1497 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 ZNF602P-201ENST00000405929 924 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 SYF2P2-201ENST00000417620 583 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 PPIAP15-201ENST00000479662 484 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC010342.1-201ENST00000514047 877 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC012468.1-201ENST00000604888 430 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC019176.2-201ENST00000611579 315 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC004241.3-201ENST00000611728 517 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AL391261.4-201ENST00000616012 481 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AL049781.1-201ENST00000623195 3585 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 AL450326.2-201ENST00000421913 1962 ntBASIC4.66□□□□□ -1.66
RPAP1Q9BWH6 RNU1-18P-201ENST00000363062 164 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AL591419.1-201ENST00000427423 339 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 OR4F13P-201ENST00000428478 931 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 RPL7P28-201ENST00000437739 740 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 RPS3AP12-201ENST00000443616 753 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 SCARNA13-201ENST00000516672 275 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AC122134.1-201ENST00000565664 1104 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 AL391497.1-201ENST00000608671 547 ntBASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
RPAP1Q9BWH6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 RNU6-984P-201ENST00000363236 109 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 RPL5P19-201ENST00000404228 893 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 KRR1P1-201ENST00000419430 803 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 PDSS1P2-201ENST00000449397 678 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC091917.2-201ENST00000505002 744 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 RNA5SP164-201ENST00000516533 110 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 DUXAP2-201ENST00000519198 589 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms