Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU7-167P-201ENST00000459160 62 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 SNORD97-201ENST00000459187 142 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 CEACAMP10-202ENST00000495431 496 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RPL23AP55-201ENST00000498163 452 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC026784.1-201ENST00000507986 352 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RBBP4P6-201ENST00000508098 202 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC096745.1-201ENST00000509945 370 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 GAPDHP62-201ENST00000515313 990 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 SNORA40.14-201ENST00000516543 86 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AL121576.1-201ENST00000556055 276 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 RN7SL697P-201ENST00000582484 299 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC011500.1-201ENST00000601963 469 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC025857.2-201ENST00000602711 238 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AL031176.1-201ENST00000604554 466 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AL390877.1-201ENST00000605704 214 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AL355816.1-201ENST00000607951 118 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 SNORA43.5-201ENST00000631270 138 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC116158.1-201ENST00000560231 2129 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AC009313.2-201ENST00000417893 1941 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 MAPK10-357ENST00000641831 2858 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 RPL10P16-201ENST00000325000 645 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 Y_RNA.26-201ENST00000362539 101 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 RNA5SP448-201ENST00000363151 111 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 Y_RNA.126-201ENST00000363382 111 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 RNU6-1059P-201ENST00000363752 98 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 SNORD46-201ENST00000364043 104 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 SNORA16.2-201ENST00000390991 127 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 HMGB3P7-201ENST00000400214 611 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 RNU6-293P-201ENST00000411259 106 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 RPL21P109-201ENST00000422213 475 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 NIP7P1-201ENST00000433227 512 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AL132765.1-201ENST00000434165 553 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AL353597.2-202ENST00000434901 373 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 NOTCH2P1-201ENST00000443481 624 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 FTH1P7-201ENST00000450676 552 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 SETP20-201ENST00000457046 852 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC117503.1-201ENST00000472241 394 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC005912.1-201ENST00000495392 255 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC105758.1-201ENST00000506038 399 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 SNORA25.11-201ENST00000515935 105 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 RNU6-685P-201ENST00000517088 95 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 RPA2P3-201ENST00000533268 770 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AL133271.1-201ENST00000538229 291 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 ATP5J2P4-201ENST00000538774 267 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC024614.1-201ENST00000577546 307 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 MIR5188-201ENST00000583467 113 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC008521.1-201ENST00000587471 187 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 HMGB2P1-201ENST00000591146 634 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC104687.2-201ENST00000604442 342 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC004852.1-201ENST00000605206 154 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 AL590099.1-201ENST00000615276 138 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 MIR4272-201ENST00000635924 64 ntBASIC6.55□□□□□ -1.36
USB1Q9BQ65 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms