Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC108064.1-201ENST00000513791 460 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC124068.1-201ENST00000563131 678 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 MIR548Y-201ENST00000582739 110 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC015726.3-201ENST00000624501 418 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC100871.1-201ENST00000507871 1456 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.15□□□□□ -1.74
RPRD1AQ96P16 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
RPRD1AQ96P16 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.15□□□□□ -1.74
RPRD1AQ96P16 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.74
RPRD1AQ96P16 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPRD1AQ96P16 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 GSTA7P-201ENST00000438425 448 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 CBX1P4-201ENST00000439415 457 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 RPL21P89-201ENST00000444021 467 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 RSL24D1P2-201ENST00000445584 366 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 RPS11P1-201ENST00000451072 473 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 FABP3P2-201ENST00000453169 399 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC018635.1-201ENST00000468292 1030 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 SNORA26.10-201ENST00000516427 141 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 OR5M7P-201ENST00000526140 972 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC107016.1-201ENST00000550463 337 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC067805.1-201ENST00000559344 470 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 VN1R85P-201ENST00000601587 426 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC083899.3-201ENST00000603413 594 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC104662.1-201ENST00000604448 511 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 AC110741.2-201ENST00000605278 268 ntBASIC4.15□□□□□ -1.75
RPRD1AQ96P16 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.15□□□□□ -1.75
RPRD1AQ96P16 MTCO1P14-201ENST00000441695 1559 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC007685.1-201ENST00000329806 452 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 SNORD74.4-201ENST00000364129 80 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 MIR1251-201ENST00000408552 70 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 RPL7P4-203ENST00000430239 730 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 YWHAEP5-201ENST00000431545 765 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC006511.1-201ENST00000470614 315 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC068305.1-201ENST00000497406 726 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 FTH1P21-201ENST00000512179 511 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 MTND1P6-201ENST00000523621 946 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC084824.1-201ENST00000550917 1005 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AL049870.4-201ENST00000555741 486 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AC120057.2-201ENST00000571520 271 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AP003117.1-201ENST00000602771 554 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 MIR7973-1-201ENST00000614683 76 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AP004607.9-201ENST00000618202 316 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 MIR6500-201ENST00000622700 86 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 AP003072.4-201ENST00000624580 310 ntBASIC4.14□□□□□ -1.75
RPRD1AQ96P16 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms