Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.37□□□□□ -1.55
HPS3Q969F9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.37□□□□□ -1.55
HPS3Q969F9 MIR4999-201ENST00000585029 91 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 NF1P5-201ENST00000588287 448 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.37□□□□□ -1.55
HPS3Q969F9 AC010424.2-201ENST00000607594 443 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.37□□□□□ -1.55
HPS3Q969F9 AC133644.2-201ENST00000608142 540 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 Mico1.1-201ENST00000611698 204 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 AL049539.1-201ENST00000611964 459 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 AC243756.2-201ENST00000618406 463 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 AC087385.3-201ENST00000620477 187 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 MKKS-204ENST00000639674 192 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.37□□□□□ -1.55
HPS3Q969F9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS3Q969F9 AC083843.3-201ENST00000623679 2186 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS3Q969F9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS3Q969F9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS3Q969F9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS3Q969F9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HPS3Q969F9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HPS3Q969F9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HPS3Q969F9 LINC01109-201ENST00000603837 3081 ntBASIC5.37□□□□□ -1.55
HPS3Q969F9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 OR56B2P-201ENST00000317102 954 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 RN7SKP115-201ENST00000363177 317 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 SNORA51.8-201ENST00000384234 132 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 SNORA68.2-201ENST00000391263 128 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AL121978.1-201ENST00000402778 359 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 E2F6P2-201ENST00000420708 748 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 USP9YP26-201ENST00000421008 661 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.36□□□□□ -1.55
HPS3Q969F9 EIF4HP2-201ENST00000424380 563 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 CKS1BP6-201ENST00000424932 240 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.36□□□□□ -1.55
HPS3Q969F9 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 AC239809.1-201ENST00000450470 217 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 RPL12P26-201ENST00000452430 487 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.36□□□□□ -1.55
HPS3Q969F9 NF1P3-201ENST00000457709 450 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 RN7SL558P-201ENST00000497468 299 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 NDUFB5P1-201ENST00000508134 564 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.36□□□□□ -1.55
HPS3Q969F9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HPS3Q969F9 AC090888.1-201ENST00000561335 1141 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS3Q969F9 MIR4646-201ENST00000580775 63 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 MIR4472-2-201ENST00000582069 67 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 MIR3936-201ENST00000584304 110 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC008687.2-201ENST00000597865 520 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC104785.1-201ENST00000603220 588 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 DUXAP11-201ENST00000603858 526 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS3Q969F9 AC007497.1-201ENST00000610421 561 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 AC091905.4-201ENST00000623432 202 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC026634.1-201ENST00000634369 198 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC007671.2-201ENST00000637344 619 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 AC107982.1-201ENST00000507171 1300 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 SAMMSON-226ENST00000642089 1582 ntBASIC5.36□□□□□ -1.55
HPS3Q969F9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS3Q969F9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HPS3Q969F9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS3Q969F9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS3Q969F9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HPS3Q969F9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.35□□□□□ -1.55
HPS3Q969F9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 INTS6P1-201ENST00000504674 2530 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 DDX18P3-201ENST00000404856 2007 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 PHKBP1-201ENST00000450951 1951 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AL731566.1-201ENST00000620490 1937 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 ZNF542P-204ENST00000482727 1305 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 RN7SKP224-201ENST00000364140 325 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 RNU6-621P-201ENST00000364752 109 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS3Q969F9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS3Q969F9 U3.30-201ENST00000391308 210 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AL109941.1-201ENST00000401925 229 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 Z97832.1-201ENST00000402490 328 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 HNRNPDP2-201ENST00000406475 478 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms