Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC087894.1-201ENST00000538359 518 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC006518.2-201ENST00000542513 940 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC092470.1-201ENST00000546187 132 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AL121834.1-201ENST00000572284 509 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 RN7SL652P-201ENST00000577769 300 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC091178.1-203ENST00000584586 279 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AL390816.3-201ENST00000604527 1066 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 AL391358.1-201ENST00000605342 190 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTP4A1Q93096 AC124312.6-202ENST00000623624 418 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 SDAD1P1-202ENST00000524156 2051 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.13□□□□□ -1.75
PTP4A1Q93096 FAM91A3P-201ENST00000456826 2544 ntBASIC4.13□□□□□ -1.75
PTP4A1Q93096 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 A2MP1-204ENST00000566278 4130 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 ZNF734P-201ENST00000419494 1534 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 DBF4P1-201ENST00000412976 1892 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 RN7SKP115-201ENST00000363177 317 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 RNU6-1226P-201ENST00000384317 107 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 SNORA40.4-201ENST00000390971 128 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 TAF13P2-201ENST00000416876 286 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL391219.1-201ENST00000422570 483 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 NRBF2P3-201ENST00000432731 865 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 ARL4AP4-201ENST00000434170 518 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 PRDX3P4-201ENST00000470828 747 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 TMED11P-201ENST00000479478 690 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC012158.1-204ENST00000483430 465 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 RNA5SP309-201ENST00000516670 106 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AP003355.1-201ENST00000518956 587 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 IGHV3-32-201ENST00000519182 355 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 OR4A45P-201ENST00000529954 901 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 CYB5AP5-201ENST00000549779 389 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 LSM6P2-201ENST00000552208 177 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC009117.1-201ENST00000563948 554 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC010928.3-201ENST00000587712 541 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AP001542.2-201ENST00000593141 364 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 BNIP3P32-201ENST00000600015 554 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL355812.1-201ENST00000603215 216 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AC023762.1-201ENST00000603280 584 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL049634.3-201ENST00000604968 457 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 BNIP3P19-201ENST00000605397 577 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AP002360.3-201ENST00000607673 710 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL513477.2-201ENST00000607858 568 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL121594.5-201ENST00000631724 573 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PTP4A1Q93096 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 AL031985.3-201ENST00000565390 2449 ntBASIC4.12□□□□□ -1.75
PTP4A1Q93096 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTP4A1Q93096 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
PTP4A1Q93096 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTP4A1Q93096 SNORD74.4-201ENST00000364129 80 ntBASIC4.11□□□□□ -1.75
PTP4A1Q93096 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms