Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 NPM1P48-201ENST00000436002 853 ntBASIC5.84□□□□□ -1.47
TOPBP1Q92547 AC004069.2-201ENST00000505438 1114 ntBASIC5.84□□□□□ -1.47
TOPBP1Q92547 HIGD1AP3-201ENST00000515857 278 ntBASIC5.84□□□□□ -1.47
TOPBP1Q92547 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.84□□□□□ -1.47
TOPBP1Q92547 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.84□□□□□ -1.47
TOPBP1Q92547 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.84□□□□□ -1.47
TOPBP1Q92547 FAM35BP-202ENST00000497389 3337 ntBASIC5.84□□□□□ -1.47
TOPBP1Q92547 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TOPBP1Q92547 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
TOPBP1Q92547 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TOPBP1Q92547 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TOPBP1Q92547 RPL7P38-201ENST00000488396 739 ntBASIC5.84□□□□□ -1.48
TOPBP1Q92547 AC002069.2-201ENST00000603580 883 ntBASIC5.84□□□□□ -1.48
TOPBP1Q92547 AC073657.2-201ENST00000605661 303 ntBASIC5.84□□□□□ -1.48
TOPBP1Q92547 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TOPBP1Q92547 RNA5SP126-201ENST00000365092 109 ntBASIC5.83□□□□□ -1.48
TOPBP1Q92547 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 AL160175.1-201ENST00000428124 247 ntBASIC5.83□□□□□ -1.48
TOPBP1Q92547 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 AC096638.2-201ENST00000434965 711 ntBASIC5.83□□□□□ -1.48
TOPBP1Q92547 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 AC110794.1-201ENST00000505816 425 ntBASIC5.83□□□□□ -1.48
TOPBP1Q92547 AC004024.1-201ENST00000549244 247 ntBASIC5.83□□□□□ -1.48
TOPBP1Q92547 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TOPBP1Q92547 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TOPBP1Q92547 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.83□□□□□ -1.48
TOPBP1Q92547 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TOPBP1Q92547 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 DDX6P1-205ENST00000441966 1436 ntBASIC5.82□□□□□ -1.48
TOPBP1Q92547 AC092111.2-201ENST00000611627 1414 ntBASIC5.82□□□□□ -1.48
TOPBP1Q92547 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TOPBP1Q92547 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TOPBP1Q92547 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 RPS29P31-201ENST00000446147 164 ntBASIC5.82□□□□□ -1.48
TOPBP1Q92547 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
TOPBP1Q92547 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TOPBP1Q92547 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TOPBP1Q92547 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TOPBP1Q92547 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TOPBP1Q92547 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 AC233263.6-201ENST00000631132 1963 ntBASIC5.81□□□□□ -1.48
TOPBP1Q92547 RPS3AP43-201ENST00000479743 781 ntBASIC5.81□□□□□ -1.48
TOPBP1Q92547 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 ATP5A1P2-202ENST00000616464 443 ntBASIC5.81□□□□□ -1.48
TOPBP1Q92547 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 AC083843.3-201ENST00000623679 2186 ntBASIC5.81□□□□□ -1.48
TOPBP1Q92547 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TOPBP1Q92547 AC007656.2-201ENST00000624902 4547 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TOPBP1Q92547 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TOPBP1Q92547 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TOPBP1Q92547 U3.23-201ENST00000391132 200 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 RN7SL594P-201ENST00000470590 287 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 AC138409.2-202ENST00000507274 458 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 AC118465.1-201ENST00000513820 1271 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.8□□□□□ -1.48
TOPBP1Q92547 AC092868.3-201ENST00000560515 784 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 AC009852.2-201ENST00000567898 485 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 AC012603.1-201ENST00000606424 528 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TOPBP1Q92547 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TOPBP1Q92547 HSPA8P17-201ENST00000427029 1382 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 AP000542.2-201ENST00000623199 6179 ntBASIC5.8□□□□□ -1.48
TOPBP1Q92547 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.8□□□□□ -1.48
TOPBP1Q92547 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TOPBP1Q92547 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 IL6STP1-201ENST00000346911 1020 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 RNU1-18P-201ENST00000363062 164 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 AL353705.1-201ENST00000433468 480 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 BTG4P1-201ENST00000510421 183 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 AC015802.5-201ENST00000607478 399 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms