Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 SNRPGP15-201ENST00000600149 222 ntBASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 AL133243.1-201ENST00000614487 366 ntBASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 AC124312.6-202ENST00000623624 418 ntBASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 AC112200.1-201ENST00000625015 234 ntBASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 AC008013.2-202ENST00000637965 364 ntBASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPTSSBQ8NFR3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC008264.2-201ENST00000610193 3731 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RNA5SP383-201ENST00000362934 120 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 SNORA51.4-201ENST00000364993 124 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 SNORA37-201ENST00000384504 129 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 SNORA26.7-201ENST00000391288 122 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 SKINT1L-201ENST00000401057 817 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL136116.1-201ENST00000403591 381 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RNA5SP344-201ENST00000411081 104 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 OR51B3P-201ENST00000412287 913 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 CRYBB2P1-203ENST00000415709 538 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC010740.1-201ENST00000417035 684 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL139095.3-201ENST00000419672 1203 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 GLRXP1-201ENST00000423261 334 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 USP9YP36-201ENST00000424581 829 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 HIGD1AP4-201ENST00000430194 280 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 MRPL50P1-201ENST00000431951 384 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 HMGB1P37-201ENST00000439613 609 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC069540.1-201ENST00000446320 988 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 CCRL1P1-201ENST00000449542 1053 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RPS26P41-201ENST00000450370 284 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL356390.1-201ENST00000455684 397 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC092691.2-201ENST00000461787 803 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC094085.1-201ENST00000468914 584 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC093755.1-201ENST00000512950 1023 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 MRPS5P3-201ENST00000515577 166 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RN7SKP66-201ENST00000516681 231 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC022832.1-201ENST00000530718 645 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC004024.1-201ENST00000549244 247 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RPL23AP87-202ENST00000573039 466 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AP000919.1-202ENST00000581139 1264 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC009779.8-202ENST00000607990 932 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC019193.2-201ENST00000610012 634 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL359198.2-201ENST00000611836 194 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC008115.4-201ENST00000619780 775 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 CR392039.4-201ENST00000624968 501 ntBASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SPTSSBQ8NFR3 RNA5SP366-201ENST00000365454 123 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AP002088.1-201ENST00000382740 395 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 MIR143-201ENST00000385300 106 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RPS26P8-201ENST00000393490 348 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RNA5SP492-201ENST00000411330 114 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RN7SKP293-201ENST00000411389 296 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RNU2-71P-201ENST00000411395 189 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AL096701.2-201ENST00000416920 238 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 MFSD13B-201ENST00000420133 1290 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms