Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 AC123786.2-201ENST00000603459 275 ntBASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 AL109618.2-201ENST00000605527 211 ntBASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 OR6R2P-201ENST00000609216 300 ntBASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 AC112484.5-201ENST00000624189 228 ntBASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 AL049555.1-201ENST00000562834 1933 ntBASIC4.17□□□□□ -1.74
CCDC112Q8NEF3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 RNU1-13P-201ENST00000384499 162 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 RNU11-4P-201ENST00000391149 133 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 SNORA81-201ENST00000408493 178 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 RPL31P12-201ENST00000422587 358 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 CDC27P1-201ENST00000445384 715 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 RNU7-170P-201ENST00000459303 61 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC010468.1-201ENST00000461022 817 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 NPM1P17-201ENST00000479221 602 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 YPEL5P3-201ENST00000547227 352 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC106785.1-201ENST00000565935 262 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 MTND2P13-201ENST00000577438 1039 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC010200.2-201ENST00000605098 235 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 AC009229.4-201ENST00000623854 1947 ntBASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC112Q8NEF3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.15□□□□□ -1.74
CCDC112Q8NEF3 AC009313.2-201ENST00000417893 1941 ntBASIC4.15□□□□□ -1.74
CCDC112Q8NEF3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC112Q8NEF3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC112Q8NEF3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 RNA5SP239-201ENST00000410218 129 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 LIPT1P1-201ENST00000415870 1186 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 COX6CP15-201ENST00000426313 211 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AL359073.1-201ENST00000448036 403 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 RPL23AP73-201ENST00000492507 471 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 RPS27AP13-201ENST00000498403 237 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC108941.1-201ENST00000502853 530 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 NDUFB9P3-201ENST00000521269 501 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 PDCL2P2-201ENST00000533651 189 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC006116.5-201ENST00000591936 559 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC000123.2-201ENST00000623124 461 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC010608.2-201ENST00000624830 470 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 MIR7153-201ENST00000637758 57 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 AC073073.2-201ENST00000609827 2578 ntBASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC112Q8NEF3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 SNORA48.7-201ENST00000391302 135 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 AC025750.1-201ENST00000399891 379 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 PPIAP31-201ENST00000405422 495 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 RNU6-603P-201ENST00000411403 107 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 RPL7P53-201ENST00000421245 739 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 AC006989.1-201ENST00000427212 131 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 FTH1P6-201ENST00000430768 320 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 AC122718.1-201ENST00000439448 744 ntBASIC4.14□□□□□ -1.75
CCDC112Q8NEF3 HMGB3P8-201ENST00000449709 577 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms