Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RPS26P40-201ENST00000435209 294 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 H2AFZP6-201ENST00000444403 394 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 RANP8-201ENST00000444720 713 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AL500522.2-201ENST00000448562 343 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AL136097.1-201ENST00000456945 913 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC111000.5-201ENST00000506559 1178 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 MTCO1P30-201ENST00000515244 580 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 RNA5SP315-201ENST00000516340 116 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 RNA5SP312-201ENST00000517068 116 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 NPM1P52-201ENST00000518264 846 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 IGKV2-23-201ENST00000518729 323 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 MIR5047-201ENST00000579212 100 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC020910.2-201ENST00000603635 610 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AL390816.3-201ENST00000604527 1066 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 MIR6748-201ENST00000610433 71 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AL139089.1-201ENST00000620372 975 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AP003400.2-201ENST00000624036 666 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 AP002001.2-201ENST00000529025 1469 ntBASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF439Q8NDP4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 RNU6-697P-201ENST00000363348 107 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC068538.1-201ENST00000376856 336 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 MIR141-201ENST00000384975 95 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 MIR199A2-201ENST00000385289 110 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 TRGV6-201ENST00000417928 299 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 HMGB3P30-201ENST00000457863 606 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 RPS7P7-201ENST00000463499 571 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 NDUFA5P9-201ENST00000472609 340 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC090877.1-201ENST00000561418 344 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC007620.3-201ENST00000608131 497 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 MIR378J-201ENST00000611988 109 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC006338.2-201ENST00000616864 791 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC112484.5-201ENST00000624189 228 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC020978.9-201ENST00000624380 1141 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC244205.2-202ENST00000635781 342 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 ATE1-AS1-202ENST00000636460 506 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC000367.1-201ENST00000452711 1766 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC025125.1-201ENST00000624743 1922 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AL118496.1-201ENST00000440201 1812 ntBASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
ZNF439Q8NDP4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC006504.1-201ENST00000562493 3666 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms