Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC119501.1-201ENST00000603646 475 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 HMGB1P50-201ENST00000605814 607 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC005021.1-201ENST00000608730 355 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 MIR6500-201ENST00000622700 86 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 RPL23AP61-201ENST00000623642 466 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 U3.15-201ENST00000365398 212 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 HMGB3P5-201ENST00000428894 612 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 RPS27AP12-201ENST00000429552 465 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AL353093.1-201ENST00000441292 436 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 HSFY6P-201ENST00000445573 403 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 YWHAQP9-201ENST00000445891 512 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 VN1R48P-201ENST00000448149 1036 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AL500522.2-201ENST00000448562 343 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 RPS4XP15-201ENST00000489210 795 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 MIR2116-201ENST00000517221 80 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 NPM1P35-201ENST00000533043 868 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC120057.2-201ENST00000571520 271 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 MIR4512-201ENST00000583257 77 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AL592436.1-201ENST00000605135 558 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC012531.5-201ENST00000611375 151 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC019080.5-201ENST00000624891 757 ntBASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CCDC65Q8IXS2 MTND4P10-201ENST00000446199 1363 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 RNU1-87P-201ENST00000363727 170 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 SNORD6-201ENST00000365444 73 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 RN7SKP56-201ENST00000410513 331 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 PTP4A1P5-201ENST00000420305 455 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AL159169.1-201ENST00000421119 127 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 YY1P1-201ENST00000427625 668 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AL117339.2-201ENST00000430475 180 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 OR4C10P-201ENST00000434991 931 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 HMGN2P7-201ENST00000456186 273 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 FTH1P21-201ENST00000512179 511 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AC034244.2-201ENST00000514668 858 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AC008802.1-201ENST00000519121 791 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 MTATP6P25-201ENST00000574491 261 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AL096803.3-201ENST00000609032 532 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 ATE1-AS1-202ENST00000636460 506 ntBASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC65Q8IXS2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 MIR372-201ENST00000362225 67 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 MIR199A2-201ENST00000385289 110 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 OR6K4P-201ENST00000423179 955 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 OR8F1P-201ENST00000425243 930 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 MTCYBP29-201ENST00000436327 1006 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 ARL5AP3-201ENST00000439327 386 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms