Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TRGVB-201ENST00000453257 471 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 BX276092.8-201ENST00000455722 250 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RPL7AP52-201ENST00000458096 790 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 snoU109.1-201ENST00000459339 135 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RPL7P39-201ENST00000481157 744 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RN7SL629P-201ENST00000489622 285 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC114781.4-201ENST00000513707 639 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-202P-201ENST00000515998 96 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 SNORA18.6-201ENST00000516792 115 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-430P-201ENST00000517078 107 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 MIR3176-201ENST00000582210 90 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 MIR4719-201ENST00000585233 84 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 SUGT1P3-202ENST00000604259 383 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC090578.1-201ENST00000604955 591 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC091965.4-201ENST00000607691 587 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC097468.3-201ENST00000607956 456 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC025574.2-201ENST00000615621 514 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL118522.2-201ENST00000616045 615 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL139089.1-201ENST00000620372 975 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 MIR6863-201ENST00000636112 90 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AP002001.2-201ENST00000529025 1469 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC019072.1-201ENST00000604535 1551 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC079097.1-201ENST00000512187 1399 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 OR9K1P-202ENST00000641111 3217 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AL121886.1-201ENST00000358609 435 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 RN7SKP162-201ENST00000363605 345 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 U3.10-201ENST00000364459 214 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 RNU1-136P-201ENST00000384181 164 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 Y_RNA.450-201ENST00000384198 113 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 SNORA5.1-201ENST00000384275 131 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-729P-201ENST00000384399 107 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-809P-201ENST00000384461 107 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 SNRPEP2-201ENST00000397592 279 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 FCF1P10-201ENST00000407590 479 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 MIR1277-201ENST00000408536 78 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 METTL15P3-201ENST00000415522 1221 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC234782.4-201ENST00000417646 1048 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC000111.3-201ENST00000433478 193 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 KRT8P51-201ENST00000438938 274 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 RPL7P36-201ENST00000444633 681 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 MTND5P20-201ENST00000448677 143 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 PSPHP1-201ENST00000450062 261 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 SNRPFP4-201ENST00000456366 242 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 HMGB1P36-201ENST00000487709 576 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 UBA52P3-201ENST00000491303 382 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 RPS4XP14-201ENST00000493072 781 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC069439.1-201ENST00000494739 167 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AC060780.2-201ENST00000589047 198 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 AL356055.1-201ENST00000602528 446 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 MIR6837-201ENST00000620884 64 ntBASIC5.41□□□□□ -1.54
TRIM48Q8IWZ4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms