Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL732292.1-201ENST00000426692 226 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 BTF3P10-201ENST00000433415 495 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 CBX1P4-201ENST00000439415 457 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AL353093.1-201ENST00000441292 436 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 XKRY2-201ENST00000442362 1093 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 RANP8-201ENST00000444720 713 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 RN7SL860P-201ENST00000473738 223 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 TRBV12-2-201ENST00000489763 344 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 NIPA2P2-201ENST00000496376 1083 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC025459.1-201ENST00000504072 156 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC093720.1-201ENST00000505681 714 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 HAUS1P3-201ENST00000523909 662 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC090877.1-201ENST00000561418 344 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC011477.5-201ENST00000586571 259 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 MIR7973-1-201ENST00000614683 76 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AL162233.1-201ENST00000620014 944 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC009501.3-201ENST00000605001 1352 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RNA5SP447-201ENST00000363749 119 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RNA5SP399-201ENST00000364003 117 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RNVU1-6-201ENST00000364688 164 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RNA5SP505-201ENST00000364748 108 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 CYB5AP4-201ENST00000396692 399 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RNU4-74P-201ENST00000411280 161 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RPL21P109-201ENST00000422213 475 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 OR5AW1P-201ENST00000426334 1006 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 SKP1P1-201ENST00000438081 489 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RPL34P26-201ENST00000445636 354 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 Z95152.1-201ENST00000453556 656 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 NDUFA12P1-201ENST00000455914 406 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC007686.1-201ENST00000488511 463 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RPS23P1-201ENST00000491662 432 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 SUMO2P20-201ENST00000520803 283 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 TOMM20P2-201ENST00000540082 421 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 PSMB7P1-201ENST00000556349 514 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AP003117.1-201ENST00000602771 554 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AL355802.4-201ENST00000607635 548 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC138393.1-206ENST00000540997 1886 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 MTND4P10-201ENST00000446199 1363 ntBASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NUDCD3Q8IVD9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 RNU6-398P-201ENST00000384143 109 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 MIR192-201ENST00000384915 110 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL031663.1-201ENST00000437445 219 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC041039.1-201ENST00000485656 536 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 RNA5SP309-201ENST00000516670 106 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms