Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC104072.1-201ENST00000568817 668 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AP001160.4-201ENST00000596971 382 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC133794.1-201ENST00000602731 914 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC068790.5-201ENST00000602741 355 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71Q8IV32 OR2BH1P-201ENST00000608850 864 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC018645.2-201ENST00000609151 472 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC245100.7-201ENST00000609678 442 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC024941.1-201ENST00000612250 334 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 RMST_10.1-201ENST00000616309 154 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AL138955.1-201ENST00000622881 1040 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC006065.6-201ENST00000625201 545 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC71Q8IV32 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AP000756.2-201ENST00000624168 2567 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL133412.1-201ENST00000380194 2992 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 RNU6-481P-201ENST00000384194 107 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 RPS26P8-201ENST00000393490 348 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 SDHCP2-201ENST00000398565 501 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AP000357.1-201ENST00000409926 1165 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL450992.3-201ENST00000413192 568 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 CYP4F29P-201ENST00000420685 446 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 SEC63P1-201ENST00000425785 1258 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL158073.1-201ENST00000426848 1104 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 HSFY7P-201ENST00000432672 318 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 HSFY8P-201ENST00000437934 318 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC243772.1-201ENST00000451620 410 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 VN1R32P-201ENST00000452234 905 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 HSFY5P-201ENST00000453726 309 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 UQCRHP4-201ENST00000471686 272 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC108145.1-201ENST00000503770 153 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 OR5AK3P-201ENST00000527486 1297 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL352979.3-201ENST00000553515 247 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC025884.1-201ENST00000556034 378 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 BNIP3P27-201ENST00000599991 412 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC090525.3-201ENST00000605601 189 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC144521.1-201ENST00000607148 956 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AP005229.2-201ENST00000609980 697 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC064801.1-201ENST00000612025 407 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 VN1R9P-201ENST00000614184 867 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 uc_338.9-201ENST00000617424 182 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AL356489.2-201ENST00000566968 3528 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 BX005019.1-201ENST00000561881 1810 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 AC017007.4-201ENST00000503353 1352 ntBASIC3.99□□□□□ -1.77
CCDC71Q8IV32 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71Q8IV32 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71Q8IV32 AC018555.1-201ENST00000567548 1980 ntBASIC3.98□□□□□ -1.77
CCDC71Q8IV32 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71Q8IV32 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71Q8IV32 MFSD8-242ENST00000641690 4199 ntBASIC3.98□□□□□ -1.77
CCDC71Q8IV32 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71Q8IV32 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71Q8IV32 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC71Q8IV32 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms