Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC091178.1-203ENST00000584586 279 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 VN1R87P-201ENST00000596706 487 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC133794.1-201ENST00000602731 914 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC090181.2-201ENST00000602975 672 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC113194.1-201ENST00000606037 500 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC008966.2-201ENST00000606157 453 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AP002360.3-201ENST00000607673 710 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC124016.2-201ENST00000610058 665 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AC099669.2-201ENST00000616549 437 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 AL512427.1-201ENST00000618593 349 ntBASIC4.62□□□□□ -1.67
PRPF39Q86UA1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PRPF39Q86UA1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RNU6-353P-201ENST00000364266 108 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC068538.1-201ENST00000376856 336 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RNU6-549P-201ENST00000384433 107 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 SDHCP2-201ENST00000398565 501 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 DSTNP4-201ENST00000399472 474 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL603865.2-201ENST00000401679 213 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL355143.1-201ENST00000407101 841 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC092638.1-201ENST00000411966 1275 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL592293.2-201ENST00000422292 996 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 EIF4EP1-201ENST00000422311 642 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 GTF2IP2-201ENST00000424290 697 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL732292.1-201ENST00000426692 226 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 YWHAZP8-201ENST00000436935 731 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 GSTA7P-201ENST00000438425 448 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 MTND2P39-201ENST00000457230 764 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 snoU13.7-201ENST00000459220 104 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC012158.1-204ENST00000483430 465 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RNU6-488P-201ENST00000515918 99 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AP001542.2-201ENST00000593141 364 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RNU6-1192P-201ENST00000612197 107 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RNU6-489P-201ENST00000618289 107 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AL356118.1-201ENST00000635272 1078 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 MIR6830-201ENST00000636015 70 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 BX649567.1-201ENST00000642071 1134 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 RAD17P1-201ENST00000418130 2042 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 AC107081.3-201ENST00000612715 2034 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 MTND4P8-201ENST00000514997 1362 ntBASIC4.61□□□□□ -1.67
PRPF39Q86UA1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
PRPF39Q86UA1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 RNU1-108P-201ENST00000362556 161 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 RPL7P27-201ENST00000403775 720 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 OR2X1P-201ENST00000421144 687 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 CHIAP3-201ENST00000423668 1133 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC234779.1-201ENST00000425910 285 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 RPL23AP93-201ENST00000440847 484 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 RPS27AP15-201ENST00000447672 466 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms